Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-6P43688 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.57□□□□□ -0.56
Nkx2-6P43688 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.57□□□□□ -0.56
Nkx2-6P43688 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Nkx2-6P43688 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Gm11941-201ENSMUST00000119904 610 ntBASIC11.57□□□□□ -0.56
Nkx2-6P43688 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.57□□□□□ -0.56
Nkx2-6P43688 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Gm22334-201ENSMUST00000158070 133 ntBASIC11.57□□□□□ -0.56
Nkx2-6P43688 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.57□□□□□ -0.56
Nkx2-6P43688 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.57□□□□□ -0.56
Nkx2-6P43688 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.57□□□□□ -0.56
Nkx2-6P43688 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.57□□□□□ -0.56
Nkx2-6P43688 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Nkx2-6P43688 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.57□□□□□ -0.56
Nkx2-6P43688 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.57□□□□□ -0.56
Nkx2-6P43688 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.56□□□□□ -0.56
Nkx2-6P43688 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.56□□□□□ -0.56
Nkx2-6P43688 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Gm12616-201ENSMUST00000118594 382 ntBASIC11.56□□□□□ -0.56
Nkx2-6P43688 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Gm20426-201ENSMUST00000173657 440 ntBASIC11.56□□□□□ -0.56
Nkx2-6P43688 Gm12624-201ENSMUST00000177615 382 ntBASIC11.56□□□□□ -0.56
Nkx2-6P43688 Gm12621-201ENSMUST00000177760 382 ntBASIC11.56□□□□□ -0.56
Nkx2-6P43688 Gm12615-201ENSMUST00000177970 382 ntBASIC11.56□□□□□ -0.56
Nkx2-6P43688 Gm12622-201ENSMUST00000177975 382 ntBASIC11.56□□□□□ -0.56
Nkx2-6P43688 Gm12627-201ENSMUST00000178412 382 ntBASIC11.56□□□□□ -0.56
Nkx2-6P43688 Gm12625-201ENSMUST00000179122 382 ntBASIC11.56□□□□□ -0.56
Nkx2-6P43688 Gm12614-201ENSMUST00000179586 382 ntBASIC11.56□□□□□ -0.56
Nkx2-6P43688 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Gm12613-201ENSMUST00000180323 382 ntBASIC11.56□□□□□ -0.56
Nkx2-6P43688 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.56□□□□□ -0.56
Nkx2-6P43688 Gm44100-201ENSMUST00000204329 436 ntBASIC11.56□□□□□ -0.56
Nkx2-6P43688 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.56□□□□□ -0.56
Nkx2-6P43688 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.56□□□□□ -0.56
Nkx2-6P43688 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms