Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
TfamP40630 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
TfamP40630 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TfamP40630 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.83□□□□□ -0.52
TfamP40630 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TfamP40630 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.83□□□□□ -0.52
TfamP40630 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.83□□□□□ -0.52
TfamP40630 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.83□□□□□ -0.52
TfamP40630 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Gm13342-201ENSMUST00000121055 207 ntBASIC11.83□□□□□ -0.52
TfamP40630 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
TfamP40630 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.83□□□□□ -0.52
TfamP40630 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.83□□□□□ -0.52
TfamP40630 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.83□□□□□ -0.52
TfamP40630 Gm44958-201ENSMUST00000203734 736 ntBASIC11.83□□□□□ -0.52
TfamP40630 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.83□□□□□ -0.52
TfamP40630 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.83□□□□□ -0.52
TfamP40630 Gm10076-201ENSMUST00000073238 384 ntBASIC11.83□□□□□ -0.52
TfamP40630 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TfamP40630 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
TfamP40630 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.83□□□□□ -0.52
TfamP40630 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TfamP40630 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
TfamP40630 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TfamP40630 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
TfamP40630 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.82□□□□□ -0.52
TfamP40630 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
TfamP40630 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
TfamP40630 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.82□□□□□ -0.52
TfamP40630 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
TfamP40630 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
TfamP40630 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.82□□□□□ -0.52
TfamP40630 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.82□□□□□ -0.52
TfamP40630 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.82□□□□□ -0.52
TfamP40630 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.82□□□□□ -0.52
TfamP40630 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.82□□□□□ -0.52
TfamP40630 Gm39404-201ENSMUST00000216350 313 ntBASIC11.82□□□□□ -0.52
TfamP40630 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.82□□□□□ -0.52
TfamP40630 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.82□□□□□ -0.52
TfamP40630 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TfamP40630 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TfamP40630 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.81□□□□□ -0.52
TfamP40630 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TfamP40630 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
TfamP40630 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.81□□□□□ -0.52
TfamP40630 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TfamP40630 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms