Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Timp3P39876 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Timp3P39876 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Timp3P39876 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Timp3P39876 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Timp3P39876 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Timp3P39876 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
Timp3P39876 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.06□□□□□ -0.8
Timp3P39876 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.06□□□□□ -0.8
Timp3P39876 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Timp3P39876 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Timp3P39876 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Timp3P39876 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.06□□□□□ -0.8
Timp3P39876 Gm13875-201ENSMUST00000120162 282 ntBASIC10.06□□□□□ -0.8
Timp3P39876 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.06□□□□□ -0.8
Timp3P39876 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Gm25043-201ENSMUST00000158604 212 ntBASIC10.06□□□□□ -0.8
Timp3P39876 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.06□□□□□ -0.8
Timp3P39876 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.06□□□□□ -0.8
Timp3P39876 Gm26461-201ENSMUST00000175064 290 ntBASIC10.06□□□□□ -0.8
Timp3P39876 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.06□□□□□ -0.8
Timp3P39876 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.06□□□□□ -0.8
Timp3P39876 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Timp3P39876 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Timp3P39876 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.06□□□□□ -0.8
Timp3P39876 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Timp3P39876 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.06□□□□□ -0.8
Timp3P39876 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Timp3P39876 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.06□□□□□ -0.8
Timp3P39876 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Timp3P39876 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Timp3P39876 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.05□□□□□ -0.8
Timp3P39876 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.05□□□□□ -0.8
Timp3P39876 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.05□□□□□ -0.8
Timp3P39876 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.05□□□□□ -0.8
Timp3P39876 Gm12997-201ENSMUST00000120207 640 ntBASIC10.05□□□□□ -0.8
Timp3P39876 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.05□□□□□ -0.8
Timp3P39876 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Timp3P39876 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.05□□□□□ -0.8
Timp3P39876 Gm8885-201ENSMUST00000189382 598 ntBASIC10.05□□□□□ -0.8
Timp3P39876 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.05□□□□□ -0.8
Timp3P39876 AA914427-201ENSMUST00000193194 1166 ntBASIC10.05□□□□□ -0.8
Timp3P39876 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.05□□□□□ -0.8
Timp3P39876 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.05□□□□□ -0.8
Timp3P39876 Gm44967-201ENSMUST00000207047 631 ntBASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms