Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Mmp13P33435 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Mmp13P33435 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Mmp13P33435 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp13P33435 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp13P33435 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.51□□□□□ -0.41
Mmp13P33435 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp13P33435 Gm18935-201ENSMUST00000212692 664 ntBASIC12.51□□□□□ -0.41
Mmp13P33435 Gm10608-202ENSMUST00000213924 676 ntBASIC12.51□□□□□ -0.41
Mmp13P33435 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.51□□□□□ -0.41
Mmp13P33435 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp13P33435 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp13P33435 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Mmp13P33435 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.51□□□□□ -0.41
Mmp13P33435 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp13P33435 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp13P33435 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp13P33435 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp13P33435 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.51□□□□□ -0.41
Mmp13P33435 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp13P33435 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp13P33435 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.51□□□□□ -0.41
Mmp13P33435 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.51□□□□□ -0.41
Mmp13P33435 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp13P33435 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp13P33435 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Mmp13P33435 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.5□□□□□ -0.41
Mmp13P33435 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Mmp13P33435 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.5□□□□□ -0.41
Mmp13P33435 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.5□□□□□ -0.41
Mmp13P33435 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.5□□□□□ -0.41
Mmp13P33435 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.5□□□□□ -0.41
Mmp13P33435 Gm11793-201ENSMUST00000120433 981 ntBASIC12.5□□□□□ -0.41
Mmp13P33435 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.5□□□□□ -0.41
Mmp13P33435 Gm11964-201ENSMUST00000120982 444 ntBASIC12.5□□□□□ -0.41
Mmp13P33435 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.5□□□□□ -0.41
Mmp13P33435 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.5□□□□□ -0.41
Mmp13P33435 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.5□□□□□ -0.41
Mmp13P33435 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.5□□□□□ -0.41
Mmp13P33435 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.5□□□□□ -0.41
Mmp13P33435 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.5□□□□□ -0.41
Mmp13P33435 Gm43118-201ENSMUST00000199149 775 ntBASIC12.5□□□□□ -0.41
Mmp13P33435 Gm44882-201ENSMUST00000205702 802 ntBASIC12.5□□□□□ -0.41
Mmp13P33435 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.5□□□□□ -0.41
Mmp13P33435 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.5□□□□□ -0.41
Mmp13P33435 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.5□□□□□ -0.41
Mmp13P33435 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Mmp13P33435 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Mmp13P33435 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Mmp13P33435 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.5□□□□□ -0.41
Mmp13P33435 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Mmp13P33435 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp13P33435 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp13P33435 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp13P33435 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Mmp13P33435 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.49□□□□□ -0.41
Mmp13P33435 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp13P33435 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Mmp13P33435 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp13P33435 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp13P33435 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Mmp13P33435 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.49□□□□□ -0.41
Mmp13P33435 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Mmp13P33435 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
Mmp13P33435 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp13P33435 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp13P33435 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp13P33435 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.49□□□□□ -0.41
Mmp13P33435 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp13P33435 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp13P33435 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp13P33435 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp13P33435 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp13P33435 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms