Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Nedd8P29595 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.24□□□□□ -0.61
Nedd8P29595 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.24□□□□□ -0.61
Nedd8P29595 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC11.24□□□□□ -0.61
Nedd8P29595 Gm4875-201ENSMUST00000118257 786 ntBASIC11.24□□□□□ -0.61
Nedd8P29595 Gm14921-201ENSMUST00000118643 908 ntBASIC11.24□□□□□ -0.61
Nedd8P29595 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Gm27321-201ENSMUST00000185021 205 ntBASIC11.24□□□□□ -0.61
Nedd8P29595 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.24□□□□□ -0.61
Nedd8P29595 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Gm44069-201ENSMUST00000204898 506 ntBASIC11.24□□□□□ -0.61
Nedd8P29595 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.24□□□□□ -0.61
Nedd8P29595 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.24□□□□□ -0.61
Nedd8P29595 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.24□□□□□ -0.61
Nedd8P29595 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.24□□□□□ -0.61
Nedd8P29595 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.24□□□□□ -0.61
Nedd8P29595 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.24□□□□□ -0.61
Nedd8P29595 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.24□□□□□ -0.61
Nedd8P29595 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Nedd8P29595 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.24□□□□□ -0.61
Nedd8P29595 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.24□□□□□ -0.61
Nedd8P29595 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.24□□□□□ -0.61
Nedd8P29595 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nedd8P29595 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.24□□□□□ -0.61
Nedd8P29595 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Nedd8P29595 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Nedd8P29595 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.23□□□□□ -0.61
Nedd8P29595 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.23□□□□□ -0.61
Nedd8P29595 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.23□□□□□ -0.61
Nedd8P29595 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Nedd8P29595 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nedd8P29595 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nedd8P29595 Gm24231-201ENSMUST00000104315 133 ntBASIC11.23□□□□□ -0.61
Nedd8P29595 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Nedd8P29595 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.23□□□□□ -0.61
Nedd8P29595 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.23□□□□□ -0.61
Nedd8P29595 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.23□□□□□ -0.61
Nedd8P29595 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.23□□□□□ -0.61
Nedd8P29595 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Nedd8P29595 Gm44882-201ENSMUST00000205702 802 ntBASIC11.23□□□□□ -0.61
Nedd8P29595 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC11.23□□□□□ -0.61
Nedd8P29595 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.23□□□□□ -0.61
Nedd8P29595 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.23□□□□□ -0.61
Nedd8P29595 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Nedd8P29595 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nedd8P29595 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.23□□□□□ -0.61
Nedd8P29595 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.23□□□□□ -0.61
Nedd8P29595 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.23□□□□□ -0.61
Nedd8P29595 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.23□□□□□ -0.61
Nedd8P29595 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nedd8P29595 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nedd8P29595 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms