Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Pde6aP27664 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.15□□□□□ -0.14
Pde6aP27664 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pde6aP27664 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Pde6aP27664 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Pde6aP27664 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pde6aP27664 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6aP27664 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6aP27664 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6aP27664 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6aP27664 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6aP27664 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6aP27664 Gm43365-201ENSMUST00000196522 2106 ntBASIC14.14□□□□□ -0.15
Pde6aP27664 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6aP27664 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6aP27664 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6aP27664 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6aP27664 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6aP27664 Mir877-201ENSMUST00000104738 85 ntBASIC14.14□□□□□ -0.15
Pde6aP27664 Gm15808-201ENSMUST00000119046 604 ntBASIC14.14□□□□□ -0.15
Pde6aP27664 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.14□□□□□ -0.15
Pde6aP27664 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.14□□□□□ -0.15
Pde6aP27664 Gm26361-201ENSMUST00000158868 186 ntBASIC14.14□□□□□ -0.15
Pde6aP27664 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Pde6aP27664 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.14□□□□□ -0.15
Pde6aP27664 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.14□□□□□ -0.15
Pde6aP27664 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.14□□□□□ -0.15
Pde6aP27664 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.14□□□□□ -0.15
Pde6aP27664 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6aP27664 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6aP27664 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6aP27664 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pde6aP27664 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6aP27664 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Pde6aP27664 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6aP27664 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.14□□□□□ -0.15
Pde6aP27664 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.14□□□□□ -0.15
Pde6aP27664 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.14□□□□□ -0.15
Pde6aP27664 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6aP27664 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6aP27664 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.14□□□□□ -0.15
Pde6aP27664 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pde6aP27664 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6aP27664 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Pde6aP27664 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pde6aP27664 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.13□□□□□ -0.15
Pde6aP27664 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6aP27664 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6aP27664 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6aP27664 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pde6aP27664 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pde6aP27664 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.13□□□□□ -0.15
Pde6aP27664 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.13□□□□□ -0.15
Pde6aP27664 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Pde6aP27664 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Pde6aP27664 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6aP27664 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6aP27664 Gm13996-201ENSMUST00000118456 430 ntBASIC14.13□□□□□ -0.15
Pde6aP27664 Gm5419-201ENSMUST00000119301 527 ntBASIC14.13□□□□□ -0.15
Pde6aP27664 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6aP27664 Gm5706-201ENSMUST00000181525 993 ntBASIC14.13□□□□□ -0.15
Pde6aP27664 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6aP27664 Gm8913-201ENSMUST00000209491 641 ntBASIC14.13□□□□□ -0.15
Pde6aP27664 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.13□□□□□ -0.15
Pde6aP27664 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.13□□□□□ -0.15
Pde6aP27664 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.13□□□□□ -0.15
Pde6aP27664 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6aP27664 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6aP27664 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6aP27664 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6aP27664 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pde6aP27664 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6aP27664 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6aP27664 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6aP27664 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6aP27664 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6aP27664 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.13□□□□□ -0.15
Pde6aP27664 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6aP27664 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pde6aP27664 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6aP27664 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6aP27664 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6aP27664 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.12□□□□□ -0.15
Pde6aP27664 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6aP27664 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6aP27664 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.12□□□□□ -0.15
Pde6aP27664 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Pde6aP27664 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.12□□□□□ -0.15
Pde6aP27664 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Pde6aP27664 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6aP27664 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6aP27664 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.12□□□□□ -0.15
Pde6aP27664 Gm17931-201ENSMUST00000208132 634 ntBASIC14.12□□□□□ -0.15
Pde6aP27664 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.12□□□□□ -0.15
Pde6aP27664 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.12□□□□□ -0.15
Pde6aP27664 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pde6aP27664 Gm5455-201ENSMUST00000058710 715 ntBASIC14.12□□□□□ -0.15
Pde6aP27664 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms