Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Col8a2P25318 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.19□□□□□ -0.78
Col8a2P25318 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.19□□□□□ -0.78
Col8a2P25318 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.19□□□□□ -0.78
Col8a2P25318 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Col8a2P25318 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.19□□□□□ -0.78
Col8a2P25318 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.19□□□□□ -0.78
Col8a2P25318 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
Col8a2P25318 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Col8a2P25318 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Mir5120-201ENSMUST00000175020 78 ntBASIC10.19□□□□□ -0.78
Col8a2P25318 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.19□□□□□ -0.78
Col8a2P25318 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC10.19□□□□□ -0.78
Col8a2P25318 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.19□□□□□ -0.78
Col8a2P25318 Gm18212-201ENSMUST00000211678 889 ntBASIC10.19□□□□□ -0.78
Col8a2P25318 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.19□□□□□ -0.78
Col8a2P25318 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Col8a2P25318 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Col8a2P25318 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Col8a2P25318 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.19□□□□□ -0.78
Col8a2P25318 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.19□□□□□ -0.78
Col8a2P25318 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a2P25318 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Col8a2P25318 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Col8a2P25318 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Col8a2P25318 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Col8a2P25318 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.18□□□□□ -0.78
Col8a2P25318 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Col8a2P25318 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.18□□□□□ -0.78
Col8a2P25318 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Col8a2P25318 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Col8a2P25318 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.18□□□□□ -0.78
Col8a2P25318 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Mir6979-201ENSMUST00000183927 56 ntBASIC10.18□□□□□ -0.78
Col8a2P25318 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.18□□□□□ -0.78
Col8a2P25318 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.18□□□□□ -0.78
Col8a2P25318 Gm19187-201ENSMUST00000206781 892 ntBASIC10.18□□□□□ -0.78
Col8a2P25318 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Col8a2P25318 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Col8a2P25318 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Col8a2P25318 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a2P25318 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Col8a2P25318 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Col8a2P25318 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms