Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
TP20293 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.54□□□□□ -0.56
TP20293 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.54□□□□□ -0.56
TP20293 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
TP20293 Gm13297-201ENSMUST00000120205 934 ntBASIC11.54□□□□□ -0.56
TP20293 Gm13315-201ENSMUST00000120376 991 ntBASIC11.54□□□□□ -0.56
TP20293 Gm13342-201ENSMUST00000121055 207 ntBASIC11.54□□□□□ -0.56
TP20293 Gm27501-201ENSMUST00000183599 107 ntBASIC11.54□□□□□ -0.56
TP20293 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.54□□□□□ -0.56
TP20293 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
TP20293 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
TP20293 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.54□□□□□ -0.56
TP20293 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TP20293 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.54□□□□□ -0.56
TP20293 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.53□□□□□ -0.56
TP20293 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.53□□□□□ -0.56
TP20293 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
TP20293 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TP20293 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.53□□□□□ -0.56
TP20293 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
TP20293 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.53□□□□□ -0.56
TP20293 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.53□□□□□ -0.56
TP20293 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
TP20293 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.53□□□□□ -0.56
TP20293 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
TP20293 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.53□□□□□ -0.56
TP20293 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
TP20293 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
TP20293 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
TP20293 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.53□□□□□ -0.56
TP20293 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.53□□□□□ -0.56
TP20293 Gm12314-201ENSMUST00000118104 538 ntBASIC11.53□□□□□ -0.56
TP20293 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TP20293 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TP20293 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TP20293 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.53□□□□□ -0.56
TP20293 Mir1938-201ENSMUST00000158746 100 ntBASIC11.53□□□□□ -0.56
TP20293 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TP20293 Gm18935-201ENSMUST00000212692 664 ntBASIC11.53□□□□□ -0.56
TP20293 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.53□□□□□ -0.56
TP20293 Gm8227-201ENSMUST00000223306 571 ntBASIC11.53□□□□□ -0.56
TP20293 Morn2-202ENSMUST00000227729 656 ntBASIC11.53□□□□□ -0.56
TP20293 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TP20293 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TP20293 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TP20293 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TP20293 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.53□□□□□ -0.56
TP20293 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TP20293 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.53□□□□□ -0.56
TP20293 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TP20293 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
TP20293 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
TP20293 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TP20293 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
TP20293 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
TP20293 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TP20293 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.53□□□□□ -0.56
TP20293 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.53□□□□□ -0.56
TP20293 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.53□□□□□ -0.56
TP20293 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TP20293 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
TP20293 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
TP20293 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TP20293 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
TP20293 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
TP20293 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TP20293 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.52□□□□□ -0.56
TP20293 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
TP20293 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TP20293 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
TP20293 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TP20293 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TP20293 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TP20293 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.52□□□□□ -0.57
TP20293 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
TP20293 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
TP20293 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.52□□□□□ -0.57
TP20293 Gm4986-201ENSMUST00000119731 549 ntBASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms