Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P20040 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
P20040 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
P20040 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P20040 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P20040 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P20040 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P20040 Cog3-203ENSMUST00000227473 4197 ntBASIC10.87□□□□□ -0.67
P20040 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.87□□□□□ -0.67
P20040 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.87□□□□□ -0.67
P20040 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
P20040 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.87□□□□□ -0.67
P20040 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 Gm6023-201ENSMUST00000118217 606 ntBASIC10.87□□□□□ -0.67
P20040 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.87□□□□□ -0.67
P20040 Gm12291-201ENSMUST00000121627 311 ntBASIC10.87□□□□□ -0.67
P20040 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.87□□□□□ -0.67
P20040 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.87□□□□□ -0.67
P20040 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.87□□□□□ -0.67
P20040 Gm23363-201ENSMUST00000175024 79 ntBASIC10.87□□□□□ -0.67
P20040 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.87□□□□□ -0.67
P20040 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 Gm45331-201ENSMUST00000209868 554 ntBASIC10.87□□□□□ -0.67
P20040 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
P20040 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.87□□□□□ -0.67
P20040 Gm9823-201ENSMUST00000051212 327 ntBASIC10.87□□□□□ -0.67
P20040 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.87□□□□□ -0.67
P20040 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.87□□□□□ -0.67
P20040 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
P20040 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.87□□□□□ -0.67
P20040 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.87□□□□□ -0.67
P20040 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.87□□□□□ -0.67
P20040 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P20040 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
P20040 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P20040 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.86□□□□□ -0.67
P20040 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.86□□□□□ -0.67
P20040 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P20040 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
P20040 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
P20040 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
P20040 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P20040 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P20040 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P20040 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.86□□□□□ -0.67
P20040 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.86□□□□□ -0.67
P20040 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P20040 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
P20040 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P20040 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
P20040 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P20040 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.86□□□□□ -0.67
P20040 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.86□□□□□ -0.67
P20040 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P20040 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
P20040 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.86□□□□□ -0.67
P20040 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.86□□□□□ -0.67
P20040 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P20040 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.86□□□□□ -0.67
P20040 Gm3890-201ENSMUST00000182416 207 ntBASIC10.86□□□□□ -0.67
P20040 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
P20040 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.86□□□□□ -0.67
P20040 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P20040 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.86□□□□□ -0.67
P20040 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.86□□□□□ -0.67
P20040 Gm32025-201ENSMUST00000217960 307 ntBASIC10.86□□□□□ -0.67
P20040 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.86□□□□□ -0.67
P20040 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P20040 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P20040 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P20040 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P20040 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P20040 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.86□□□□□ -0.67
P20040 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P20040 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.86□□□□□ -0.67
P20040 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P20040 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
P20040 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P20040 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms