Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.43□□□□□ -0.42
Hmga1P17095 Gm17931-201ENSMUST00000208132 634 ntBASIC12.43□□□□□ -0.42
Hmga1P17095 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmga1P17095 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.43□□□□□ -0.42
Hmga1P17095 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmga1P17095 Gm10288-201ENSMUST00000084614 537 ntBASIC12.43□□□□□ -0.42
Hmga1P17095 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.43□□□□□ -0.42
Hmga1P17095 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmga1P17095 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmga1P17095 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmga1P17095 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Hmga1P17095 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmga1P17095 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.43□□□□□ -0.42
Hmga1P17095 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmga1P17095 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmga1P17095 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Hmga1P17095 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmga1P17095 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmga1P17095 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmga1P17095 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmga1P17095 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.43□□□□□ -0.42
Hmga1P17095 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmga1P17095 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmga1P17095 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmga1P17095 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Hmga1P17095 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmga1P17095 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmga1P17095 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmga1P17095 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmga1P17095 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.42□□□□□ -0.42
Hmga1P17095 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.42□□□□□ -0.42
Hmga1P17095 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmga1P17095 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmga1P17095 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmga1P17095 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Hmga1P17095 Map1b-203ENSMUST00000223725 2669 ntBASIC12.42□□□□□ -0.42
Hmga1P17095 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.42□□□□□ -0.42
Hmga1P17095 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Hmga1P17095 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmga1P17095 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmga1P17095 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.42□□□□□ -0.42
Hmga1P17095 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmga1P17095 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Hmga1P17095 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.42□□□□□ -0.42
Hmga1P17095 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmga1P17095 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmga1P17095 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.42□□□□□ -0.42
Hmga1P17095 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.42□□□□□ -0.42
Hmga1P17095 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.42□□□□□ -0.42
Hmga1P17095 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmga1P17095 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmga1P17095 Ginm1-202ENSMUST00000065124 300 ntBASIC12.42□□□□□ -0.42
Hmga1P17095 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hmga1P17095 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmga1P17095 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmga1P17095 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmga1P17095 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmga1P17095 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmga1P17095 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.42□□□□□ -0.42
Hmga1P17095 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Hmga1P17095 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmga1P17095 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hmga1P17095 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmga1P17095 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.42□□□□□ -0.42
Hmga1P17095 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.42□□□□□ -0.42
Hmga1P17095 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmga1P17095 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmga1P17095 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Hmga1P17095 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmga1P17095 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.42□□□□□ -0.42
Hmga1P17095 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hmga1P17095 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Hmga1P17095 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hmga1P17095 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.41□□□□□ -0.42
Hmga1P17095 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.41□□□□□ -0.42
Hmga1P17095 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Hmga1P17095 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Gm11663-201ENSMUST00000117888 290 ntBASIC12.41□□□□□ -0.42
Hmga1P17095 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.41□□□□□ -0.42
Hmga1P17095 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Gm4310-201ENSMUST00000177847 889 ntBASIC12.41□□□□□ -0.42
Hmga1P17095 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Hmga1P17095 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Hmga1P17095 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.41□□□□□ -0.42
Hmga1P17095 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.41□□□□□ -0.42
Hmga1P17095 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmga1P17095 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms