Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc6P10629 Gm16071-201ENSMUST00000119589 793 ntBASIC13.52□□□□□ -0.25
Hoxc6P10629 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc6P10629 Gm15566-201ENSMUST00000121130 590 ntBASIC13.52□□□□□ -0.25
Hoxc6P10629 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.52□□□□□ -0.25
Hoxc6P10629 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.52□□□□□ -0.25
Hoxc6P10629 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc6P10629 Gm21092-201ENSMUST00000178995 955 ntBASIC13.52□□□□□ -0.25
Hoxc6P10629 Mir6998-201ENSMUST00000183343 64 ntBASIC13.52□□□□□ -0.25
Hoxc6P10629 Gm17826-201ENSMUST00000189720 798 ntBASIC13.52□□□□□ -0.25
Hoxc6P10629 Gm42518-201ENSMUST00000196277 938 ntBASIC13.52□□□□□ -0.25
Hoxc6P10629 Gm43520-201ENSMUST00000197996 164 ntBASIC13.52□□□□□ -0.25
Hoxc6P10629 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc6P10629 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.52□□□□□ -0.25
Hoxc6P10629 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC13.52□□□□□ -0.25
Hoxc6P10629 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.52□□□□□ -0.25
Hoxc6P10629 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.52□□□□□ -0.25
Hoxc6P10629 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.52□□□□□ -0.25
Hoxc6P10629 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Hoxc6P10629 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc6P10629 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc6P10629 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc6P10629 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Hoxc6P10629 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc6P10629 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc6P10629 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc6P10629 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc6P10629 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc6P10629 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc6P10629 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc6P10629 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc6P10629 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Hoxc6P10629 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Hoxc6P10629 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc6P10629 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc6P10629 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.51□□□□□ -0.25
Hoxc6P10629 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc6P10629 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Hoxc6P10629 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.51□□□□□ -0.25
Hoxc6P10629 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc6P10629 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hoxc6P10629 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc6P10629 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc6P10629 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc6P10629 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc6P10629 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc6P10629 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Hoxc6P10629 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.51□□□□□ -0.25
Hoxc6P10629 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc6P10629 Gm22711-201ENSMUST00000116890 133 ntBASIC13.51□□□□□ -0.25
Hoxc6P10629 Gm8731-201ENSMUST00000118088 412 ntBASIC13.51□□□□□ -0.25
Hoxc6P10629 Gm15004-201ENSMUST00000119192 630 ntBASIC13.51□□□□□ -0.25
Hoxc6P10629 Gm5419-201ENSMUST00000119301 527 ntBASIC13.51□□□□□ -0.25
Hoxc6P10629 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.51□□□□□ -0.25
Hoxc6P10629 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc6P10629 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc6P10629 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc6P10629 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.51□□□□□ -0.25
Hoxc6P10629 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.51□□□□□ -0.25
Hoxc6P10629 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc6P10629 Gm5714-201ENSMUST00000197343 566 ntBASIC13.51□□□□□ -0.25
Hoxc6P10629 Gm43186-201ENSMUST00000198130 824 ntBASIC13.51□□□□□ -0.25
Hoxc6P10629 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.51□□□□□ -0.25
Hoxc6P10629 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hoxc6P10629 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.51□□□□□ -0.25
Hoxc6P10629 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.51□□□□□ -0.25
Hoxc6P10629 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.51□□□□□ -0.25
Hoxc6P10629 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.51□□□□□ -0.25
Hoxc6P10629 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.51□□□□□ -0.25
Hoxc6P10629 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc6P10629 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Hoxc6P10629 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc6P10629 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc6P10629 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc6P10629 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hoxc6P10629 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc6P10629 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc6P10629 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.51□□□□□ -0.25
Hoxc6P10629 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc6P10629 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Hoxc6P10629 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Hoxc6P10629 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.5□□□□□ -0.25
Hoxc6P10629 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc6P10629 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc6P10629 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc6P10629 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc6P10629 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc6P10629 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc6P10629 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc6P10629 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Hoxc6P10629 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc6P10629 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.5□□□□□ -0.25
Hoxc6P10629 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc6P10629 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc6P10629 Gm12579-201ENSMUST00000118040 783 ntBASIC13.5□□□□□ -0.25
Hoxc6P10629 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.5□□□□□ -0.25
Hoxc6P10629 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.5□□□□□ -0.25
Hoxc6P10629 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC13.5□□□□□ -0.25
Hoxc6P10629 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc6P10629 Gm22442-201ENSMUST00000157256 144 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms