Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ccl1P10146 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ccl1P10146 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC9.44□□□□□ -0.9
Ccl1P10146 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.44□□□□□ -0.9
Ccl1P10146 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Ccl1P10146 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
Ccl1P10146 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ccl1P10146 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Ccl1P10146 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Ccl1P10146 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Ccl1P10146 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
Ccl1P10146 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Ccl1P10146 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC9.43□□□□□ -0.9
Ccl1P10146 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Ccl1P10146 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Gm15544-201ENSMUST00000118776 1531 ntBASIC9.43□□□□□ -0.9
Ccl1P10146 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC9.43□□□□□ -0.9
Ccl1P10146 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Ccl1P10146 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.43□□□□□ -0.9
Ccl1P10146 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC9.43□□□□□ -0.9
Ccl1P10146 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Ccl1P10146 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Ccl1P10146 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC9.43□□□□□ -0.9
Ccl1P10146 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC9.43□□□□□ -0.9
Ccl1P10146 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Ccl1P10146 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.43□□□□□ -0.9
Ccl1P10146 Gm4780-202ENSMUST00000215200 2644 ntBASIC9.43□□□□□ -0.9
Ccl1P10146 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Ccl1P10146 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Ccl1P10146 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccl1P10146 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ccl1P10146 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ccl1P10146 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Ccl1P10146 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Ccl1P10146 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Ccl1P10146 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ccl1P10146 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.42□□□□□ -0.9
Ccl1P10146 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ccl1P10146 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ccl1P10146 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ccl1P10146 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ccl1P10146 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ccl1P10146 Gm7537-201ENSMUST00000221660 1414 ntBASIC9.42□□□□□ -0.9
Ccl1P10146 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
Ccl1P10146 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ccl1P10146 Gm38055-201ENSMUST00000195353 2217 ntBASIC9.42□□□□□ -0.9
Ccl1P10146 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ccl1P10146 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC9.42□□□□□ -0.9
Ccl1P10146 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Ccl1P10146 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Ccl1P10146 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC9.42□□□□□ -0.9
Ccl1P10146 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ccl1P10146 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ccl1P10146 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Ccl1P10146 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ccl1P10146 Gm15703-201ENSMUST00000120250 880 ntBASIC9.42□□□□□ -0.9
Ccl1P10146 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ccl1P10146 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ccl1P10146 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC9.42□□□□□ -0.9
Ccl1P10146 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms