Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.42□□□□□ -0.58
Sod1P08228 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sod1P08228 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.42□□□□□ -0.58
Sod1P08228 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 Gm12795-201ENSMUST00000117594 539 ntBASIC11.42□□□□□ -0.58
Sod1P08228 Gm16166-201ENSMUST00000118291 787 ntBASIC11.42□□□□□ -0.58
Sod1P08228 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 Gm6485-201ENSMUST00000160676 439 ntBASIC11.42□□□□□ -0.58
Sod1P08228 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
Sod1P08228 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.42□□□□□ -0.58
Sod1P08228 Gm18367-201ENSMUST00000176139 600 ntBASIC11.42□□□□□ -0.58
Sod1P08228 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.42□□□□□ -0.58
Sod1P08228 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.42□□□□□ -0.58
Sod1P08228 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.42□□□□□ -0.58
Sod1P08228 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.42□□□□□ -0.58
Sod1P08228 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.42□□□□□ -0.58
Sod1P08228 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.42□□□□□ -0.58
Sod1P08228 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sod1P08228 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Sod1P08228 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Sod1P08228 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sod1P08228 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.41□□□□□ -0.58
Sod1P08228 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.41□□□□□ -0.58
Sod1P08228 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.41□□□□□ -0.58
Sod1P08228 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sod1P08228 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Sod1P08228 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.41□□□□□ -0.58
Sod1P08228 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Sod1P08228 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Gm23153-201ENSMUST00000175323 313 ntBASIC11.41□□□□□ -0.58
Sod1P08228 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sod1P08228 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.41□□□□□ -0.58
Sod1P08228 Gm12407-201ENSMUST00000180219 324 ntBASIC11.41□□□□□ -0.58
Sod1P08228 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Sod1P08228 Gm37458-201ENSMUST00000194055 410 ntBASIC11.41□□□□□ -0.58
Sod1P08228 Gm9645-201ENSMUST00000197131 792 ntBASIC11.41□□□□□ -0.58
Sod1P08228 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.41□□□□□ -0.58
Sod1P08228 Gm44506-201ENSMUST00000206278 965 ntBASIC11.41□□□□□ -0.58
Sod1P08228 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.41□□□□□ -0.58
Sod1P08228 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.41□□□□□ -0.58
Sod1P08228 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Sod1P08228 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.41□□□□□ -0.58
Sod1P08228 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.41□□□□□ -0.58
Sod1P08228 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Sod1P08228 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.41□□□□□ -0.58
Sod1P08228 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sod1P08228 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sod1P08228 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sod1P08228 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sod1P08228 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sod1P08228 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sod1P08228 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sod1P08228 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms