Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
P04224 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P04224 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
P04224 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
P04224 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P04224 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P04224 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
P04224 Gm11978-201ENSMUST00000122315 466 ntBASIC10.73□□□□□ -0.69
P04224 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.73□□□□□ -0.69
P04224 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC10.73□□□□□ -0.69
P04224 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P04224 Gm44397-201ENSMUST00000195950 113 ntBASIC10.73□□□□□ -0.69
P04224 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.73□□□□□ -0.69
P04224 Gm16372-201ENSMUST00000073088 450 ntBASIC10.73□□□□□ -0.69
P04224 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P04224 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
P04224 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.73□□□□□ -0.69
P04224 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P04224 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P04224 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
P04224 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
P04224 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
P04224 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P04224 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
P04224 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P04224 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
P04224 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P04224 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P04224 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
P04224 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
P04224 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
P04224 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.72□□□□□ -0.69
P04224 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 Mir686-201ENSMUST00000102174 109 ntBASIC10.72□□□□□ -0.69
P04224 Gm12341-201ENSMUST00000119724 503 ntBASIC10.72□□□□□ -0.69
P04224 Gm13813-201ENSMUST00000120998 787 ntBASIC10.72□□□□□ -0.69
P04224 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.72□□□□□ -0.69
P04224 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
P04224 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.72□□□□□ -0.69
P04224 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.72□□□□□ -0.69
P04224 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.72□□□□□ -0.69
P04224 Gm6218-201ENSMUST00000219812 628 ntBASIC10.72□□□□□ -0.69
P04224 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
P04224 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 Gm26035-201ENSMUST00000083065 308 ntBASIC10.72□□□□□ -0.69
P04224 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.72□□□□□ -0.69
P04224 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
P04224 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P04224 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.72□□□□□ -0.69
P04224 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
P04224 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P04224 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P04224 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
P04224 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P04224 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.71□□□□□ -0.69
P04224 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
P04224 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P04224 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
P04224 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
P04224 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
P04224 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P04224 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.71□□□□□ -0.69
P04224 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.71□□□□□ -0.69
P04224 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.71□□□□□ -0.69
P04224 Gm14057-201ENSMUST00000120631 482 ntBASIC10.71□□□□□ -0.69
P04224 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
P04224 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P04224 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P04224 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P04224 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
P04224 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P04224 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.71□□□□□ -0.69
P04224 Gm27390-201ENSMUST00000184516 176 ntBASIC10.71□□□□□ -0.69
P04224 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P04224 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.71□□□□□ -0.69
P04224 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P04224 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
P04224 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms