Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.7□□□□□ -0.54
P04213 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
P04213 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
P04213 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
P04213 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.7□□□□□ -0.54
P04213 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
P04213 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P04213 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04213 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04213 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04213 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.69□□□□□ -0.54
P04213 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04213 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
P04213 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.69□□□□□ -0.54
P04213 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.69□□□□□ -0.54
P04213 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04213 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.69□□□□□ -0.54
P04213 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04213 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P04213 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04213 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.69□□□□□ -0.54
P04213 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04213 Gm10434-201ENSMUST00000101158 471 ntBASIC11.69□□□□□ -0.54
P04213 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04213 Gm13786-201ENSMUST00000122371 333 ntBASIC11.69□□□□□ -0.54
P04213 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.69□□□□□ -0.54
P04213 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P04213 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P04213 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P04213 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
P04213 Gm9136-201ENSMUST00000193368 454 ntBASIC11.69□□□□□ -0.54
P04213 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.69□□□□□ -0.54
P04213 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.69□□□□□ -0.54
P04213 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.69□□□□□ -0.54
P04213 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04213 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.69□□□□□ -0.54
P04213 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.69□□□□□ -0.54
P04213 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04213 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04213 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04213 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
P04213 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04213 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.69□□□□□ -0.54
P04213 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.69□□□□□ -0.54
P04213 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04213 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.69□□□□□ -0.54
P04213 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
P04213 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.68□□□□□ -0.54
P04213 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04213 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04213 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P04213 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04213 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.68□□□□□ -0.54
P04213 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04213 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
P04213 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P04213 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04213 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04213 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.68□□□□□ -0.54
P04213 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04213 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P04213 Gm12957-201ENSMUST00000117835 377 ntBASIC11.68□□□□□ -0.54
P04213 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.68□□□□□ -0.54
P04213 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
P04213 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.68□□□□□ -0.54
P04213 Rprl1-201ENSMUST00000158050 327 ntBASIC11.68□□□□□ -0.54
P04213 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.68□□□□□ -0.54
P04213 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04213 Gm10608-202ENSMUST00000213924 676 ntBASIC11.68□□□□□ -0.54
P04213 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.68□□□□□ -0.54
P04213 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.68□□□□□ -0.54
P04213 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.68□□□□□ -0.54
P04213 Morn2-202ENSMUST00000227729 656 ntBASIC11.68□□□□□ -0.54
P04213 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
P04213 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
P04213 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.68□□□□□ -0.54
P04213 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
P04213 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.68□□□□□ -0.54
P04213 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04213 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
P04213 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04213 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.68□□□□□ -0.54
P04213 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04213 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P04213 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04213 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
P04213 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P04213 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P04213 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
P04213 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms