Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Gm14208-201ENSMUST00000119645 678 ntBASIC10.28□□□□□ -0.76
Hoxa3P02831 Gm13665-201ENSMUST00000120830 528 ntBASIC10.28□□□□□ -0.76
Hoxa3P02831 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.28□□□□□ -0.76
Hoxa3P02831 Gm27341-201ENSMUST00000183570 106 ntBASIC10.28□□□□□ -0.76
Hoxa3P02831 Gm28882-201ENSMUST00000185504 314 ntBASIC10.28□□□□□ -0.76
Hoxa3P02831 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.28□□□□□ -0.76
Hoxa3P02831 Gm44262-201ENSMUST00000204969 372 ntBASIC10.28□□□□□ -0.76
Hoxa3P02831 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.28□□□□□ -0.76
Hoxa3P02831 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.28□□□□□ -0.76
Hoxa3P02831 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.28□□□□□ -0.76
Hoxa3P02831 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Gm10076-201ENSMUST00000073238 384 ntBASIC10.28□□□□□ -0.76
Hoxa3P02831 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Hoxa3P02831 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Hoxa3P02831 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Hoxa3P02831 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hoxa3P02831 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hoxa3P02831 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hoxa3P02831 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hoxa3P02831 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.27□□□□□ -0.76
Hoxa3P02831 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Hoxa3P02831 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.27□□□□□ -0.76
Hoxa3P02831 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Hoxa3P02831 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hoxa3P02831 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hoxa3P02831 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hoxa3P02831 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Hoxa3P02831 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Hoxa3P02831 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Hoxa3P02831 Gm14130-201ENSMUST00000118417 987 ntBASIC10.27□□□□□ -0.77
Hoxa3P02831 Gm11439-201ENSMUST00000118598 409 ntBASIC10.27□□□□□ -0.77
Hoxa3P02831 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.27□□□□□ -0.77
Hoxa3P02831 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Hoxa3P02831 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.27□□□□□ -0.77
Hoxa3P02831 Gm42937-201ENSMUST00000197360 752 ntBASIC10.27□□□□□ -0.77
Hoxa3P02831 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Hoxa3P02831 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Hoxa3P02831 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.27□□□□□ -0.77
Hoxa3P02831 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Hoxa3P02831 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.27□□□□□ -0.77
Hoxa3P02831 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.27□□□□□ -0.77
Hoxa3P02831 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hoxa3P02831 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Hoxa3P02831 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hoxa3P02831 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hoxa3P02831 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hoxa3P02831 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hoxa3P02831 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hoxa3P02831 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hoxa3P02831 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms