Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a1P02463 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC14.71□□□□□ -0.05
Col4a1P02463 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC14.71□□□□□ -0.05
Col4a1P02463 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a1P02463 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC14.71□□□□□ -0.05
Col4a1P02463 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a1P02463 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Col4a1P02463 Gm4978-201ENSMUST00000071565 801 ntBASIC14.71□□□□□ -0.05
Col4a1P02463 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a1P02463 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a1P02463 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a1P02463 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a1P02463 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a1P02463 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a1P02463 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.71□□□□□ -0.05
Col4a1P02463 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.71□□□□□ -0.05
Col4a1P02463 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a1P02463 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a1P02463 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Col4a1P02463 Gm4993-201ENSMUST00000118719 1174 ntBASIC14.71□□□□□ -0.06
Col4a1P02463 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC14.71□□□□□ -0.06
Col4a1P02463 Gm18776-201ENSMUST00000188833 654 ntBASIC14.71□□□□□ -0.06
Col4a1P02463 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC14.71□□□□□ -0.06
Col4a1P02463 Gm45410-201ENSMUST00000211331 1093 ntBASIC14.71□□□□□ -0.06
Col4a1P02463 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC14.71□□□□□ -0.06
Col4a1P02463 Gm30671-201ENSMUST00000214898 318 ntBASIC14.71□□□□□ -0.06
Col4a1P02463 AC136376.2-201ENSMUST00000228819 490 ntBASIC14.71□□□□□ -0.06
Col4a1P02463 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col4a1P02463 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Col4a1P02463 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col4a1P02463 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col4a1P02463 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Col4a1P02463 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col4a1P02463 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Col4a1P02463 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC14.71□□□□□ -0.06
Col4a1P02463 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.06
Col4a1P02463 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a1P02463 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a1P02463 Gm21759-201ENSMUST00000178345 1828 ntBASIC14.7□□□□□ -0.06
Col4a1P02463 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a1P02463 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.7□□□□□ -0.06
Col4a1P02463 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a1P02463 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a1P02463 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Col4a1P02463 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Col4a1P02463 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Col4a1P02463 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Col4a1P02463 Gm45199-201ENSMUST00000207640 1507 ntBASIC14.7□□□□□ -0.06
Col4a1P02463 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a1P02463 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a1P02463 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a1P02463 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a1P02463 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Col4a1P02463 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC14.7□□□□□ -0.06
Col4a1P02463 Gm12516-201ENSMUST00000120819 385 ntBASIC14.7□□□□□ -0.06
Col4a1P02463 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC14.7□□□□□ -0.06
Col4a1P02463 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a1P02463 Gm18561-201ENSMUST00000206027 804 ntBASIC14.7□□□□□ -0.06
Col4a1P02463 Gm18059-201ENSMUST00000208073 580 ntBASIC14.7□□□□□ -0.06
Col4a1P02463 Gm45592-201ENSMUST00000209605 1043 ntBASIC14.7□□□□□ -0.06
Col4a1P02463 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC14.7□□□□□ -0.06
Col4a1P02463 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a1P02463 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Col4a1P02463 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a1P02463 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a1P02463 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 AC130823.1-201ENSMUST00000228929 1549 ntBASIC14.69□□□□□ -0.06
Col4a1P02463 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
Col4a1P02463 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
Col4a1P02463 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.69□□□□□ -0.06
Col4a1P02463 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Col4a1P02463 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 Gm11340-201ENSMUST00000119226 412 ntBASIC14.69□□□□□ -0.06
Col4a1P02463 Rn7s6-201ENSMUST00000175005 291 ntBASIC14.69□□□□□ -0.06
Col4a1P02463 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC14.69□□□□□ -0.06
Col4a1P02463 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC14.69□□□□□ -0.06
Col4a1P02463 Gm28324-201ENSMUST00000187913 264 ntBASIC14.69□□□□□ -0.06
Col4a1P02463 Gm18706-201ENSMUST00000210053 1066 ntBASIC14.69□□□□□ -0.06
Col4a1P02463 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC14.69□□□□□ -0.06
Col4a1P02463 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col4a1P02463 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col4a1P02463 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col4a1P02463 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Col4a1P02463 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms