Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
P01852 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
P01852 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
P01852 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.19□□□□□ -0.62
P01852 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
P01852 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.19□□□□□ -0.62
P01852 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.19□□□□□ -0.62
P01852 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
P01852 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
P01852 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.19□□□□□ -0.62
P01852 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Gm9083-201ENSMUST00000120423 819 ntBASIC11.19□□□□□ -0.62
P01852 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.19□□□□□ -0.62
P01852 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.19□□□□□ -0.62
P01852 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Gm9630-201ENSMUST00000178304 885 ntBASIC11.19□□□□□ -0.62
P01852 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
P01852 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.19□□□□□ -0.62
P01852 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.19□□□□□ -0.62
P01852 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.19□□□□□ -0.62
P01852 Gm13097-201ENSMUST00000210722 397 ntBASIC11.19□□□□□ -0.62
P01852 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
P01852 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.19□□□□□ -0.62
P01852 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
P01852 Gm10312-201ENSMUST00000078515 489 ntBASIC11.19□□□□□ -0.62
P01852 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.19□□□□□ -0.62
P01852 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
P01852 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01852 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01852 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.18□□□□□ -0.62
P01852 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.18□□□□□ -0.62
P01852 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.18□□□□□ -0.62
P01852 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
P01852 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01852 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01852 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01852 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01852 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P01852 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01852 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
P01852 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01852 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P01852 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01852 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P01852 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01852 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P01852 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P01852 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.18□□□□□ -0.62
P01852 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P01852 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01852 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.18□□□□□ -0.62
P01852 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
P01852 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
P01852 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.18□□□□□ -0.62
P01852 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P01852 Gm15276-201ENSMUST00000145953 498 ntBASIC11.18□□□□□ -0.62
P01852 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P01852 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.18□□□□□ -0.62
P01852 Gm17376-201ENSMUST00000166016 84 ntBASIC11.18□□□□□ -0.62
P01852 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.18□□□□□ -0.62
P01852 Gm8885-201ENSMUST00000189382 598 ntBASIC11.18□□□□□ -0.62
P01852 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.18□□□□□ -0.62
P01852 Gm6082-201ENSMUST00000215204 454 ntBASIC11.18□□□□□ -0.62
P01852 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.18□□□□□ -0.62
P01852 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01852 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01852 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms