Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Mir686-201ENSMUST00000102174 109 ntBASIC8.92□□□□□ -0.98
TcraP01849 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC8.92□□□□□ -0.98
TcraP01849 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC8.92□□□□□ -0.98
TcraP01849 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC8.92□□□□□ -0.98
TcraP01849 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Gm38297-201ENSMUST00000195122 1057 ntBASIC8.92□□□□□ -0.98
TcraP01849 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC8.92□□□□□ -0.98
TcraP01849 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Gm19220-201ENSMUST00000222682 803 ntBASIC8.92□□□□□ -0.98
TcraP01849 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
TcraP01849 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
TcraP01849 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC8.92□□□□□ -0.98
TcraP01849 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
TcraP01849 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC8.92□□□□□ -0.98
TcraP01849 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC8.92□□□□□ -0.98
TcraP01849 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC8.92□□□□□ -0.98
TcraP01849 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC8.92□□□□□ -0.98
TcraP01849 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
TcraP01849 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC8.92□□□□□ -0.98
TcraP01849 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
TcraP01849 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
TcraP01849 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
TcraP01849 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
TcraP01849 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
TcraP01849 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC8.91□□□□□ -0.98
TcraP01849 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
TcraP01849 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
TcraP01849 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
TcraP01849 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
TcraP01849 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
TcraP01849 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
TcraP01849 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC8.91□□□□□ -0.98
TcraP01849 Gm15991-202ENSMUST00000212123 3565 ntBASIC8.91□□□□□ -0.98
TcraP01849 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC8.91□□□□□ -0.98
TcraP01849 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
TcraP01849 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
TcraP01849 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
TcraP01849 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
TcraP01849 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
TcraP01849 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
TcraP01849 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
TcraP01849 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
TcraP01849 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
TcraP01849 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
TcraP01849 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
TcraP01849 Gm38055-201ENSMUST00000195353 2217 ntBASIC8.91□□□□□ -0.98
TcraP01849 Gm6263-201ENSMUST00000120029 1342 ntBASIC8.91□□□□□ -0.98
TcraP01849 Syt7-204ENSMUST00000223586 1344 ntBASIC8.91□□□□□ -0.98
TcraP01849 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
TcraP01849 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
TcraP01849 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
TcraP01849 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC8.91□□□□□ -0.98
TcraP01849 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
TcraP01849 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC8.91□□□□□ -0.98
TcraP01849 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC8.91□□□□□ -0.98
TcraP01849 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC8.91□□□□□ -0.98
TcraP01849 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
TcraP01849 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC8.91□□□□□ -0.98
TcraP01849 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC8.91□□□□□ -0.98
TcraP01849 Gm31326-201ENSMUST00000191856 1048 ntBASIC8.91□□□□□ -0.98
TcraP01849 Gm36987-201ENSMUST00000194704 2979 ntBASIC8.91□□□□□ -0.98
TcraP01849 Gm43172-201ENSMUST00000202139 2137 ntBASIC8.91□□□□□ -0.98
TcraP01849 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
TcraP01849 Gm19078-201ENSMUST00000206311 727 ntBASIC8.91□□□□□ -0.98
TcraP01849 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
TcraP01849 AC073947.2-201ENSMUST00000215888 1130 ntBASIC8.91□□□□□ -0.98
TcraP01849 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms