Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcn1O88704 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcn1O88704 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.73□□□□□ -0.53
Hcn1O88704 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.73□□□□□ -0.53
Hcn1O88704 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hcn1O88704 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.73□□□□□ -0.53
Hcn1O88704 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.73□□□□□ -0.53
Hcn1O88704 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.73□□□□□ -0.53
Hcn1O88704 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hcn1O88704 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.73□□□□□ -0.53
Hcn1O88704 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.73□□□□□ -0.53
Hcn1O88704 Gm5904-201ENSMUST00000210286 865 ntBASIC11.73□□□□□ -0.53
Hcn1O88704 Gm10608-202ENSMUST00000213924 676 ntBASIC11.73□□□□□ -0.53
Hcn1O88704 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.73□□□□□ -0.53
Hcn1O88704 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.73□□□□□ -0.53
Hcn1O88704 Gm7046-201ENSMUST00000221351 977 ntBASIC11.73□□□□□ -0.53
Hcn1O88704 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcn1O88704 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcn1O88704 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcn1O88704 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcn1O88704 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcn1O88704 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hcn1O88704 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hcn1O88704 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcn1O88704 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hcn1O88704 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.73□□□□□ -0.53
Hcn1O88704 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcn1O88704 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcn1O88704 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcn1O88704 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Hcn1O88704 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcn1O88704 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hcn1O88704 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hcn1O88704 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.72□□□□□ -0.53
Hcn1O88704 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Hcn1O88704 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Hcn1O88704 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.72□□□□□ -0.53
Hcn1O88704 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.72□□□□□ -0.53
Hcn1O88704 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Hcn1O88704 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Hcn1O88704 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.72□□□□□ -0.53
Hcn1O88704 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Gm13316-201ENSMUST00000140537 691 ntBASIC11.72□□□□□ -0.53
Hcn1O88704 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Hcn1O88704 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Gm27390-201ENSMUST00000184516 176 ntBASIC11.72□□□□□ -0.53
Hcn1O88704 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.72□□□□□ -0.53
Hcn1O88704 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.72□□□□□ -0.53
Hcn1O88704 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Hcn1O88704 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Hcn1O88704 Olfr582-201ENSMUST00000098212 960 ntBASIC11.72□□□□□ -0.53
Hcn1O88704 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.72□□□□□ -0.53
Hcn1O88704 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Hcn1O88704 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hcn1O88704 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hcn1O88704 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hcn1O88704 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hcn1O88704 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hcn1O88704 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.71□□□□□ -0.53
Hcn1O88704 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hcn1O88704 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hcn1O88704 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hcn1O88704 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.53
Hcn1O88704 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hcn1O88704 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hcn1O88704 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hcn1O88704 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hcn1O88704 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Hcn1O88704 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hcn1O88704 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Hcn1O88704 Gm4986-201ENSMUST00000119731 549 ntBASIC11.71□□□□□ -0.53
Hcn1O88704 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms