Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.33□□□□□ -0.76
Cxcl13O55038 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Cxcl13O55038 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.32□□□□□ -0.76
Cxcl13O55038 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.32□□□□□ -0.76
Cxcl13O55038 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.32□□□□□ -0.76
Cxcl13O55038 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.32□□□□□ -0.76
Cxcl13O55038 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 Gm26286-201ENSMUST00000104166 134 ntBASIC10.32□□□□□ -0.76
Cxcl13O55038 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.32□□□□□ -0.76
Cxcl13O55038 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 Gm14058-201ENSMUST00000116082 735 ntBASIC10.32□□□□□ -0.76
Cxcl13O55038 Gm14247-201ENSMUST00000120950 237 ntBASIC10.32□□□□□ -0.76
Cxcl13O55038 Gm12196-201ENSMUST00000120954 262 ntBASIC10.32□□□□□ -0.76
Cxcl13O55038 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.32□□□□□ -0.76
Cxcl13O55038 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC10.32□□□□□ -0.76
Cxcl13O55038 Gm8343-201ENSMUST00000182705 994 ntBASIC10.32□□□□□ -0.76
Cxcl13O55038 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.32□□□□□ -0.76
Cxcl13O55038 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.32□□□□□ -0.76
Cxcl13O55038 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.32□□□□□ -0.76
Cxcl13O55038 Gm8956-201ENSMUST00000203939 825 ntBASIC10.32□□□□□ -0.76
Cxcl13O55038 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Cxcl13O55038 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 Gm5369-201ENSMUST00000217499 588 ntBASIC10.32□□□□□ -0.76
Cxcl13O55038 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC10.32□□□□□ -0.76
Cxcl13O55038 Gm807-202ENSMUST00000224929 408 ntBASIC10.32□□□□□ -0.76
Cxcl13O55038 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Cxcl13O55038 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.32□□□□□ -0.76
Cxcl13O55038 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.32□□□□□ -0.76
Cxcl13O55038 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Cxcl13O55038 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cxcl13O55038 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cxcl13O55038 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cxcl13O55038 Cog3-203ENSMUST00000227473 4197 ntBASIC10.31□□□□□ -0.76
Cxcl13O55038 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cxcl13O55038 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Cxcl13O55038 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.31□□□□□ -0.76
Cxcl13O55038 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.31□□□□□ -0.76
Cxcl13O55038 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cxcl13O55038 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cxcl13O55038 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cxcl13O55038 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.31□□□□□ -0.76
Cxcl13O55038 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cxcl13O55038 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.31□□□□□ -0.76
Cxcl13O55038 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.31□□□□□ -0.76
Cxcl13O55038 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cxcl13O55038 Gm3332-201ENSMUST00000189337 928 ntBASIC10.31□□□□□ -0.76
Cxcl13O55038 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Cxcl13O55038 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.31□□□□□ -0.76
Cxcl13O55038 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC10.31□□□□□ -0.76
Cxcl13O55038 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cxcl13O55038 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cxcl13O55038 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Cxcl13O55038 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cxcl13O55038 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cxcl13O55038 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cxcl13O55038 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cxcl13O55038 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cxcl13O55038 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cxcl13O55038 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.31□□□□□ -0.76
Cxcl13O55038 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cxcl13O55038 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cxcl13O55038 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.31□□□□□ -0.76
Cxcl13O55038 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Cxcl13O55038 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Cxcl13O55038 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.3□□□□□ -0.76
Cxcl13O55038 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.3□□□□□ -0.76
Cxcl13O55038 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms