Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Limk2O54785 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Limk2O54785 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Limk2O54785 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.41□□□□□ -0.42
Limk2O54785 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Limk2O54785 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Limk2O54785 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Limk2O54785 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Limk2O54785 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Limk2O54785 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Limk2O54785 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Limk2O54785 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Limk2O54785 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.41□□□□□ -0.42
Limk2O54785 Gm25700-201ENSMUST00000177693 110 ntBASIC12.41□□□□□ -0.42
Limk2O54785 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Limk2O54785 Gm28450-201ENSMUST00000187349 638 ntBASIC12.41□□□□□ -0.42
Limk2O54785 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Limk2O54785 Gm19994-201ENSMUST00000217086 586 ntBASIC12.41□□□□□ -0.42
Limk2O54785 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.41□□□□□ -0.42
Limk2O54785 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.41□□□□□ -0.42
Limk2O54785 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Limk2O54785 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Limk2O54785 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Limk2O54785 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.41□□□□□ -0.42
Limk2O54785 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Limk2O54785 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Limk2O54785 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Limk2O54785 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Limk2O54785 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.41□□□□□ -0.42
Limk2O54785 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.41□□□□□ -0.42
Limk2O54785 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Limk2O54785 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Limk2O54785 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Limk2O54785 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Limk2O54785 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Limk2O54785 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Limk2O54785 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limk2O54785 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limk2O54785 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Limk2O54785 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.4□□□□□ -0.42
Limk2O54785 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limk2O54785 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Limk2O54785 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limk2O54785 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.4□□□□□ -0.42
Limk2O54785 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Limk2O54785 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Limk2O54785 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.4□□□□□ -0.42
Limk2O54785 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limk2O54785 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limk2O54785 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Limk2O54785 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limk2O54785 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limk2O54785 Gm23912-201ENSMUST00000104687 87 ntBASIC12.4□□□□□ -0.42
Limk2O54785 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Limk2O54785 Gm22334-201ENSMUST00000158070 133 ntBASIC12.4□□□□□ -0.42
Limk2O54785 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limk2O54785 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Limk2O54785 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.4□□□□□ -0.42
Limk2O54785 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.4□□□□□ -0.42
Limk2O54785 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Limk2O54785 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limk2O54785 Gm42599-201ENSMUST00000201308 469 ntBASIC12.4□□□□□ -0.42
Limk2O54785 Gm44651-201ENSMUST00000207343 372 ntBASIC12.4□□□□□ -0.42
Limk2O54785 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.4□□□□□ -0.42
Limk2O54785 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.4□□□□□ -0.42
Limk2O54785 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limk2O54785 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limk2O54785 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limk2O54785 Gm10312-201ENSMUST00000078515 489 ntBASIC12.4□□□□□ -0.42
Limk2O54785 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Limk2O54785 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Limk2O54785 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limk2O54785 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limk2O54785 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limk2O54785 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limk2O54785 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limk2O54785 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limk2O54785 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Limk2O54785 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.4□□□□□ -0.43
Limk2O54785 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Limk2O54785 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Limk2O54785 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limk2O54785 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limk2O54785 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limk2O54785 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limk2O54785 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limk2O54785 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limk2O54785 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limk2O54785 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limk2O54785 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.39□□□□□ -0.43
Limk2O54785 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limk2O54785 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limk2O54785 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Limk2O54785 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limk2O54785 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limk2O54785 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.39□□□□□ -0.43
Limk2O54785 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limk2O54785 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Limk2O54785 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.39□□□□□ -0.43
Limk2O54785 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms