Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm45059-201ENSMUST00000205558 1077 ntBASIC9.66□□□□□ -0.86
Efnb3O35393 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC9.66□□□□□ -0.86
Efnb3O35393 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.66□□□□□ -0.86
Efnb3O35393 Gm5186-201ENSMUST00000218781 920 ntBASIC9.66□□□□□ -0.86
Efnb3O35393 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC9.66□□□□□ -0.86
Efnb3O35393 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 n-R5s77-201ENSMUST00000083757 119 ntBASIC9.66□□□□□ -0.86
Efnb3O35393 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Efnb3O35393 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Efnb3O35393 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Efnb3O35393 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Efnb3O35393 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Efnb3O35393 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Efnb3O35393 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Gm45776-201ENSMUST00000212366 1522 ntBASIC9.66□□□□□ -0.86
Efnb3O35393 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC9.66□□□□□ -0.86
Efnb3O35393 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Efnb3O35393 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.65□□□□□ -0.86
Efnb3O35393 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC9.65□□□□□ -0.86
Efnb3O35393 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Gm5912-201ENSMUST00000122282 1438 ntBASIC9.65□□□□□ -0.86
Efnb3O35393 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Efnb3O35393 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC9.65□□□□□ -0.86
Efnb3O35393 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Efnb3O35393 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC9.65□□□□□ -0.86
Efnb3O35393 Gm15163-201ENSMUST00000120749 1302 ntBASIC9.65□□□□□ -0.86
Efnb3O35393 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC9.65□□□□□ -0.86
Efnb3O35393 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC9.65□□□□□ -0.86
Efnb3O35393 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC9.65□□□□□ -0.86
Efnb3O35393 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC9.65□□□□□ -0.86
Efnb3O35393 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Efnb3O35393 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Efnb3O35393 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Efnb3O35393 Gm37748-201ENSMUST00000194379 1140 ntBASIC9.65□□□□□ -0.86
Efnb3O35393 Gm37922-201ENSMUST00000195596 455 ntBASIC9.65□□□□□ -0.86
Efnb3O35393 Gm38671-201ENSMUST00000200573 130 ntBASIC9.65□□□□□ -0.86
Efnb3O35393 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC9.65□□□□□ -0.86
Efnb3O35393 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC9.65□□□□□ -0.86
Efnb3O35393 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.65□□□□□ -0.86
Efnb3O35393 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Efnb3O35393 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Efnb3O35393 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Efnb3O35393 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Efnb3O35393 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Efnb3O35393 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC9.65□□□□□ -0.87
Efnb3O35393 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Efnb3O35393 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC9.65□□□□□ -0.87
Efnb3O35393 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Efnb3O35393 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC9.65□□□□□ -0.87
Efnb3O35393 Gm9816-201ENSMUST00000122292 1414 ntBASIC9.65□□□□□ -0.87
Efnb3O35393 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC9.65□□□□□ -0.87
Efnb3O35393 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Efnb3O35393 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Efnb3O35393 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC9.64□□□□□ -0.87
Efnb3O35393 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 AL645783.1-201ENSMUST00000221416 1832 ntBASIC9.64□□□□□ -0.87
Efnb3O35393 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Efnb3O35393 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms