Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Alx4O35137 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Alx4O35137 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Alx4O35137 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Alx4O35137 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.91□□□□□ -0.66
Alx4O35137 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Alx4O35137 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.91□□□□□ -0.66
Alx4O35137 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Alx4O35137 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.9□□□□□ -0.66
Alx4O35137 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Alx4O35137 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Alx4O35137 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Alx4O35137 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Alx4O35137 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Alx4O35137 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Alx4O35137 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Alx4O35137 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Alx4O35137 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Alx4O35137 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Alx4O35137 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Alx4O35137 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Alx4O35137 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Alx4O35137 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Alx4O35137 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Alx4O35137 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Alx4O35137 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.9□□□□□ -0.66
Alx4O35137 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.9□□□□□ -0.66
Alx4O35137 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Alx4O35137 Gm12091-201ENSMUST00000146791 830 ntBASIC10.9□□□□□ -0.66
Alx4O35137 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC10.9□□□□□ -0.66
Alx4O35137 Gm5866-201ENSMUST00000177881 973 ntBASIC10.9□□□□□ -0.66
Alx4O35137 Gm8652-201ENSMUST00000181363 964 ntBASIC10.9□□□□□ -0.66
Alx4O35137 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.9□□□□□ -0.66
Alx4O35137 Gm44405-201ENSMUST00000198952 126 ntBASIC10.9□□□□□ -0.66
Alx4O35137 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.9□□□□□ -0.66
Alx4O35137 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Alx4O35137 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.9□□□□□ -0.66
Alx4O35137 Gm5781-201ENSMUST00000219792 443 ntBASIC10.9□□□□□ -0.66
Alx4O35137 Wdyhv1-206ENSMUST00000227142 786 ntBASIC10.9□□□□□ -0.66
Alx4O35137 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.9□□□□□ -0.66
Alx4O35137 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Alx4O35137 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.9□□□□□ -0.66
Alx4O35137 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.9□□□□□ -0.66
Alx4O35137 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Alx4O35137 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Alx4O35137 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Alx4O35137 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Alx4O35137 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Alx4O35137 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Alx4O35137 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Alx4O35137 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Alx4O35137 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Alx4O35137 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Alx4O35137 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Alx4O35137 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Alx4O35137 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Alx4O35137 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.67
Alx4O35137 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Alx4O35137 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Alx4O35137 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Alx4O35137 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Alx4O35137 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Alx4O35137 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.89□□□□□ -0.67
Alx4O35137 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Alx4O35137 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.89□□□□□ -0.67
Alx4O35137 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Alx4O35137 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Alx4O35137 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Alx4O35137 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.89□□□□□ -0.67
Alx4O35137 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.89□□□□□ -0.67
Alx4O35137 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Alx4O35137 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Alx4O35137 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Alx4O35137 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.89□□□□□ -0.67
Alx4O35137 Gm11918-201ENSMUST00000121660 179 ntBASIC10.89□□□□□ -0.67
Alx4O35137 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Alx4O35137 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.89□□□□□ -0.67
Alx4O35137 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Alx4O35137 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.89□□□□□ -0.67
Alx4O35137 Gm24644-201ENSMUST00000157114 139 ntBASIC10.89□□□□□ -0.67
Alx4O35137 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.89□□□□□ -0.67
Alx4O35137 Gm27892-201ENSMUST00000185017 106 ntBASIC10.89□□□□□ -0.67
Alx4O35137 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.89□□□□□ -0.67
Alx4O35137 Gm8515-201ENSMUST00000194852 576 ntBASIC10.89□□□□□ -0.67
Alx4O35137 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.89□□□□□ -0.67
Alx4O35137 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.89□□□□□ -0.67
Alx4O35137 Gm45384-201ENSMUST00000210451 277 ntBASIC10.89□□□□□ -0.67
Alx4O35137 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.89□□□□□ -0.67
Alx4O35137 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
Alx4O35137 Gm10076-201ENSMUST00000073238 384 ntBASIC10.89□□□□□ -0.67
Alx4O35137 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Alx4O35137 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Alx4O35137 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.89□□□□□ -0.67
Alx4O35137 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.89□□□□□ -0.67
Alx4O35137 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Alx4O35137 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Alx4O35137 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Alx4O35137 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Alx4O35137 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Alx4O35137 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 162.6 ms