Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Gm25047-201ENSMUST00000122667 104 ntBASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 AY036118-201ENSMUST00000200021 923 ntBASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Ighv1-86-201ENSMUST00000200562 353 ntBASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Gm44432-201ENSMUST00000203342 938 ntBASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 AC118249.1-201ENSMUST00000224822 608 ntBASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 AC132863.1-201ENSMUST00000228413 751 ntBASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Ginm1-202ENSMUST00000065124 300 ntBASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 AC156025.2-201ENSMUST00000225907 1533 ntBASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Gm3550-201ENSMUST00000105038 1656 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-1G3UXB3 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Gm11354-201ENSMUST00000121974 422 ntBASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Gm3008-201ENSMUST00000160566 571 ntBASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Gm19560-201ENSMUST00000177510 514 ntBASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Gm4430-202ENSMUST00000193902 1041 ntBASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Gm18452-201ENSMUST00000202968 1111 ntBASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Serpinb6d-202ENSMUST00000221681 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Gm9996-201ENSMUST00000070359 913 ntBASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Gm22058-201ENSMUST00000083393 310 ntBASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Gm21811-201ENSMUST00000096485 930 ntBASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Gm27013-202ENSMUST00000205067 1436 ntBASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Gm14150-201ENSMUST00000122404 1354 ntBASIC14.73□□□□□ -0.05
Nkx1-1G3UXB3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx1-1G3UXB3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Nkx1-1G3UXB3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms