Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh1F7BJK1 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Gm8018-201ENSMUST00000173536 789 ntBASIC11□□□□□ -0.65
Pcdh1F7BJK1 Gm4271-201ENSMUST00000174444 973 ntBASIC11□□□□□ -0.65
Pcdh1F7BJK1 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11□□□□□ -0.65
Pcdh1F7BJK1 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh1F7BJK1 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh1F7BJK1 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11□□□□□ -0.65
Pcdh1F7BJK1 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh1F7BJK1 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh1F7BJK1 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh1F7BJK1 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh1F7BJK1 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh1F7BJK1 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Gm12314-201ENSMUST00000118104 538 ntBASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Gm7653-201ENSMUST00000214567 508 ntBASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms