Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TprF6ZDS4 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
TprF6ZDS4 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TprF6ZDS4 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TprF6ZDS4 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.26□□□□□ -0.61
TprF6ZDS4 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TprF6ZDS4 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
TprF6ZDS4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TprF6ZDS4 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
TprF6ZDS4 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TprF6ZDS4 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
TprF6ZDS4 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TprF6ZDS4 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TprF6ZDS4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TprF6ZDS4 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.26□□□□□ -0.61
TprF6ZDS4 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TprF6ZDS4 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.26□□□□□ -0.61
TprF6ZDS4 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.26□□□□□ -0.61
TprF6ZDS4 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC11.26□□□□□ -0.61
TprF6ZDS4 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TprF6ZDS4 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.26□□□□□ -0.61
TprF6ZDS4 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TprF6ZDS4 Mir7677-201ENSMUST00000184226 67 ntBASIC11.26□□□□□ -0.61
TprF6ZDS4 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TprF6ZDS4 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TprF6ZDS4 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TprF6ZDS4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TprF6ZDS4 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TprF6ZDS4 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TprF6ZDS4 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
TprF6ZDS4 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TprF6ZDS4 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
TprF6ZDS4 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
TprF6ZDS4 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.25□□□□□ -0.61
TprF6ZDS4 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.25□□□□□ -0.61
TprF6ZDS4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
TprF6ZDS4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.25□□□□□ -0.61
TprF6ZDS4 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 Gm9625-201ENSMUST00000180422 955 ntBASIC11.25□□□□□ -0.61
TprF6ZDS4 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
TprF6ZDS4 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.25□□□□□ -0.61
TprF6ZDS4 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.25□□□□□ -0.61
TprF6ZDS4 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
TprF6ZDS4 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.25□□□□□ -0.61
TprF6ZDS4 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
TprF6ZDS4 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.25□□□□□ -0.61
TprF6ZDS4 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
TprF6ZDS4 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
TprF6ZDS4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.25□□□□□ -0.61
TprF6ZDS4 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.25□□□□□ -0.61
TprF6ZDS4 Mir744-201ENSMUST00000103261 100 ntBASIC11.25□□□□□ -0.61
TprF6ZDS4 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.25□□□□□ -0.61
TprF6ZDS4 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.25□□□□□ -0.61
TprF6ZDS4 Gm18201-201ENSMUST00000174735 875 ntBASIC11.25□□□□□ -0.61
TprF6ZDS4 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 Gm45594-201ENSMUST00000211717 241 ntBASIC11.25□□□□□ -0.61
TprF6ZDS4 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.25□□□□□ -0.61
TprF6ZDS4 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.25□□□□□ -0.61
TprF6ZDS4 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TprF6ZDS4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TprF6ZDS4 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
TprF6ZDS4 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
TprF6ZDS4 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TprF6ZDS4 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TprF6ZDS4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
TprF6ZDS4 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TprF6ZDS4 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TprF6ZDS4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TprF6ZDS4 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TprF6ZDS4 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TprF6ZDS4 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TprF6ZDS4 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TprF6ZDS4 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TprF6ZDS4 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TprF6ZDS4 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TprF6ZDS4 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TprF6ZDS4 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms