Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Ccdc188F6WEU2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc188F6WEU2 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc188F6WEU2 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc188F6WEU2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc188F6WEU2 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc188F6WEU2 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc188F6WEU2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.27□□□□□ -0.44
Ccdc188F6WEU2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc188F6WEU2 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc188F6WEU2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc188F6WEU2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc188F6WEU2 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.27□□□□□ -0.44
Ccdc188F6WEU2 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc188F6WEU2 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Gm11660-201ENSMUST00000120955 412 ntBASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Gm27956-201ENSMUST00000175604 260 ntBASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Gm37365-201ENSMUST00000193109 409 ntBASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Gm43249-201ENSMUST00000200464 458 ntBASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Gm6450-201ENSMUST00000200896 574 ntBASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Gm43997-201ENSMUST00000203986 1005 ntBASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Gm10263-201ENSMUST00000085163 300 ntBASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Ccdc188F6WEU2 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Gm26670-202ENSMUST00000226862 340 ntBASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc188F6WEU2 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms