Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 CT573047.1-201ENSMUST00000223652 851 ntBASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Gm37861-201ENSMUST00000193534 2869 ntBASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Gm45199-201ENSMUST00000207640 1507 ntBASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Gm14395-201ENSMUST00000120494 563 ntBASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Gm42779-201ENSMUST00000198807 406 ntBASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Gm43610-201ENSMUST00000199117 365 ntBASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Gm43380-201ENSMUST00000200421 220 ntBASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Gm44647-201ENSMUST00000207402 428 ntBASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 AC153962.2-201ENSMUST00000219417 550 ntBASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 CT010506.1-201ENSMUST00000223673 349 ntBASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 CT009527.1-201ENSMUST00000224205 339 ntBASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 AC154361.2-201ENSMUST00000224747 943 ntBASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Gm45266-201ENSMUST00000210111 2173 ntBASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Gm8899-201ENSMUST00000214635 1332 ntBASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Gm12943-201ENSMUST00000119616 210 ntBASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Gm8197-202ENSMUST00000193422 934 ntBASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Gm17825-201ENSMUST00000206836 794 ntBASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 AC164437.3-201ENSMUST00000228323 347 ntBASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hfm1D3Z4R1 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 AC093022.4-203ENSMUST00000228523 2657 ntBASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Gm26982-201ENSMUST00000182250 1151 ntBASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Gm6390-201ENSMUST00000215034 589 ntBASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hfm1D3Z4R1 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms