Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.95□□□□□ -0.66
Shank1D3YZU1 Gm10729-202ENSMUST00000193403 1375 ntBASIC10.95□□□□□ -0.66
Shank1D3YZU1 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Gm8343-201ENSMUST00000182705 994 ntBASIC10.95□□□□□ -0.66
Shank1D3YZU1 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.95□□□□□ -0.66
Shank1D3YZU1 Gm5542-201ENSMUST00000195485 1089 ntBASIC10.95□□□□□ -0.66
Shank1D3YZU1 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.95□□□□□ -0.66
Shank1D3YZU1 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Mirlet7i-201ENSMUST00000083472 85 ntBASIC10.95□□□□□ -0.66
Shank1D3YZU1 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.95□□□□□ -0.66
Shank1D3YZU1 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shank1D3YZU1 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Gm9022-201ENSMUST00000182482 992 ntBASIC10.94□□□□□ -0.66
Shank1D3YZU1 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.94□□□□□ -0.66
Shank1D3YZU1 Gm42518-201ENSMUST00000196277 938 ntBASIC10.94□□□□□ -0.66
Shank1D3YZU1 Gm2965-201ENSMUST00000198365 343 ntBASIC10.94□□□□□ -0.66
Shank1D3YZU1 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Gm9132-201ENSMUST00000210182 832 ntBASIC10.94□□□□□ -0.66
Shank1D3YZU1 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.94□□□□□ -0.66
Shank1D3YZU1 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.94□□□□□ -0.66
Shank1D3YZU1 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Shank1D3YZU1 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Gm11509-201ENSMUST00000117358 325 ntBASIC10.94□□□□□ -0.66
Shank1D3YZU1 Gm23119-201ENSMUST00000158610 140 ntBASIC10.94□□□□□ -0.66
Shank1D3YZU1 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Gm44958-201ENSMUST00000203734 736 ntBASIC10.94□□□□□ -0.66
Shank1D3YZU1 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms