Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Gm12887B1AVM1 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Gm9816-201ENSMUST00000122292 1414 ntBASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 AC108858.2-201ENSMUST00000228186 1425 ntBASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Gm15321-201ENSMUST00000121290 288 ntBASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Gm9022-201ENSMUST00000182482 992 ntBASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Gm7558-201ENSMUST00000193221 1165 ntBASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Gm42612-201ENSMUST00000197986 623 ntBASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Gm43170-201ENSMUST00000199827 612 ntBASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 AC134254.1-201ENSMUST00000221362 167 ntBASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Gm12887B1AVM1 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Gm16479-201ENSMUST00000121706 932 ntBASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Gm14719-201ENSMUST00000121891 340 ntBASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Gm26185-201ENSMUST00000157692 266 ntBASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Gm27243-201ENSMUST00000183964 521 ntBASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Gm37042-201ENSMUST00000193816 581 ntBASIC9.84□□□□□ -0.83
Gm12887B1AVM1 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC9.84□□□□□ -0.83
Gm12887B1AVM1 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms