Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Gm11540-201ENSMUST00000117457 780 ntBASIC9.82□□□□□ -0.84
Chd6A3KFM7 Gm12072-201ENSMUST00000118293 715 ntBASIC9.82□□□□□ -0.84
Chd6A3KFM7 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC9.82□□□□□ -0.84
Chd6A3KFM7 AC165260.3-202ENSMUST00000224550 1031 ntBASIC9.82□□□□□ -0.84
Chd6A3KFM7 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 AC174797.1-201ENSMUST00000224339 1649 ntBASIC9.82□□□□□ -0.84
Chd6A3KFM7 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Mir598-201ENSMUST00000102094 79 ntBASIC9.82□□□□□ -0.84
Chd6A3KFM7 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Gm5976-201ENSMUST00000180794 996 ntBASIC9.82□□□□□ -0.84
Chd6A3KFM7 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Gm43671-201ENSMUST00000200422 433 ntBASIC9.82□□□□□ -0.84
Chd6A3KFM7 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Chd6A3KFM7 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chd6A3KFM7 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC9.81□□□□□ -0.84
Chd6A3KFM7 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC9.81□□□□□ -0.84
Chd6A3KFM7 Zfp419-201ENSMUST00000173446 916 ntBASIC9.81□□□□□ -0.84
Chd6A3KFM7 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC9.81□□□□□ -0.84
Chd6A3KFM7 Gm12407-201ENSMUST00000180219 324 ntBASIC9.81□□□□□ -0.84
Chd6A3KFM7 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC9.81□□□□□ -0.84
Chd6A3KFM7 Gm19931-201ENSMUST00000198920 368 ntBASIC9.81□□□□□ -0.84
Chd6A3KFM7 AL844586.1-201ENSMUST00000224297 1042 ntBASIC9.81□□□□□ -0.84
Chd6A3KFM7 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Mir339-201ENSMUST00000083659 96 ntBASIC9.81□□□□□ -0.84
Chd6A3KFM7 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Gm21451-201ENSMUST00000111062 2775 ntBASIC9.81□□□□□ -0.84
Chd6A3KFM7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC9.81□□□□□ -0.84
Chd6A3KFM7 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC9.81□□□□□ -0.84
Chd6A3KFM7 AC138604.1-201ENSMUST00000226969 739 ntBASIC9.81□□□□□ -0.84
Chd6A3KFM7 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Gm5855-201ENSMUST00000200240 1305 ntBASIC9.81□□□□□ -0.84
Chd6A3KFM7 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chd6A3KFM7 Gm8617-201ENSMUST00000118796 2222 ntBASIC9.81□□□□□ -0.84
Chd6A3KFM7 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Chd6A3KFM7 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms