Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Gm10268-201ENSMUST00000085340 555 ntBASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Gm15163-201ENSMUST00000120749 1302 ntBASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Snord83b-201ENSMUST00000104546 94 ntBASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Gm11424-201ENSMUST00000121929 829 ntBASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Gm12363-201ENSMUST00000122250 668 ntBASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Gm26927-201ENSMUST00000182385 965 ntBASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 AC069562.3-201ENSMUST00000225387 587 ntBASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ighv1-11A0A0A6YWI9 Gm10339-203ENSMUST00000225409 1671 ntBASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms