Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm6447-201ENSMUST00000118905 835 ntBASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm6161-201ENSMUST00000121942 1102 ntBASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm6254-201ENSMUST00000168178 1072 ntBASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm6153-201ENSMUST00000172004 1058 ntBASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm27839-201ENSMUST00000184242 106 ntBASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm43433-201ENSMUST00000196573 481 ntBASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm5641-202ENSMUST00000198699 1080 ntBASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm5035-201ENSMUST00000215581 927 ntBASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm11618-201ENSMUST00000117946 267 ntBASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm8602-201ENSMUST00000184045 607 ntBASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm44069-201ENSMUST00000204898 506 ntBASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms