Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2afb3S4R1G7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
H2afb3S4R1G7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb3S4R1G7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb3S4R1G7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb3S4R1G7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb3S4R1G7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
H2afb3S4R1G7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb3S4R1G7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb3S4R1G7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.61■□□□□ 0.57
H2afb3S4R1G7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
H2afb3S4R1G7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb3S4R1G7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
H2afb3S4R1G7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.61■□□□□ 0.57
H2afb3S4R1G7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
H2afb3S4R1G7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
H2afb3S4R1G7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2afb3S4R1G7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.6■□□□□ 0.57
H2afb3S4R1G7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
H2afb3S4R1G7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2afb3S4R1G7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
H2afb3S4R1G7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
H2afb3S4R1G7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
H2afb3S4R1G7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H2afb3S4R1G7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
H2afb3S4R1G7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
H2afb3S4R1G7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.59■□□□□ 0.57
H2afb3S4R1G7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H2afb3S4R1G7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
H2afb3S4R1G7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H2afb3S4R1G7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.58■□□□□ 0.57
H2afb3S4R1G7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
H2afb3S4R1G7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
H2afb3S4R1G7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
H2afb3S4R1G7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
H2afb3S4R1G7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
H2afb3S4R1G7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
H2afb3S4R1G7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.57■□□□□ 0.56
H2afb3S4R1G7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
H2afb3S4R1G7 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.57■□□□□ 0.56
H2afb3S4R1G7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
H2afb3S4R1G7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
H2afb3S4R1G7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb3S4R1G7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
H2afb3S4R1G7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb3S4R1G7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.56■□□□□ 0.56
H2afb3S4R1G7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb3S4R1G7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb3S4R1G7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb3S4R1G7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb3S4R1G7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb3S4R1G7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.56■□□□□ 0.56
H2afb3S4R1G7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
H2afb3S4R1G7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb3S4R1G7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb3S4R1G7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
H2afb3S4R1G7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb3S4R1G7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb3S4R1G7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb3S4R1G7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
H2afb3S4R1G7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb3S4R1G7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
H2afb3S4R1G7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb3S4R1G7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.55■□□□□ 0.56
H2afb3S4R1G7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb3S4R1G7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb3S4R1G7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb3S4R1G7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.55■□□□□ 0.56
H2afb3S4R1G7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2afb3S4R1G7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2afb3S4R1G7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.54■□□□□ 0.56
H2afb3S4R1G7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2afb3S4R1G7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2afb3S4R1G7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
H2afb3S4R1G7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2afb3S4R1G7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2afb3S4R1G7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2afb3S4R1G7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
H2afb3S4R1G7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2afb3S4R1G7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
H2afb3S4R1G7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2afb3S4R1G7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
H2afb3S4R1G7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
H2afb3S4R1G7 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.53■□□□□ 0.56
H2afb3S4R1G7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2afb3S4R1G7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
H2afb3S4R1G7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2afb3S4R1G7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2afb3S4R1G7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
H2afb3S4R1G7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
H2afb3S4R1G7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
H2afb3S4R1G7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.52■□□□□ 0.56
H2afb3S4R1G7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.52■□□□□ 0.56
H2afb3S4R1G7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
H2afb3S4R1G7 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.52■□□□□ 0.55
H2afb3S4R1G7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
H2afb3S4R1G7 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
H2afb3S4R1G7 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
H2afb3S4R1G7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb3S4R1G7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms