Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Crlf3Q9Z2L7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Crlf3Q9Z2L7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Crlf3Q9Z2L7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Crlf3Q9Z2L7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Crlf3Q9Z2L7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Crlf3Q9Z2L7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Crlf3Q9Z2L7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Crlf3Q9Z2L7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.89■□□□□ 0.93
Crlf3Q9Z2L7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.89■□□□□ 0.93
Crlf3Q9Z2L7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Crlf3Q9Z2L7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Crlf3Q9Z2L7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.88■□□□□ 0.93
Crlf3Q9Z2L7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Crlf3Q9Z2L7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Crlf3Q9Z2L7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Crlf3Q9Z2L7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.88■□□□□ 0.93
Crlf3Q9Z2L7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Crlf3Q9Z2L7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Crlf3Q9Z2L7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Crlf3Q9Z2L7 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.87■□□□□ 0.93
Crlf3Q9Z2L7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Crlf3Q9Z2L7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Crlf3Q9Z2L7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Crlf3Q9Z2L7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Crlf3Q9Z2L7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Crlf3Q9Z2L7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Crlf3Q9Z2L7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Crlf3Q9Z2L7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Crlf3Q9Z2L7 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Crlf3Q9Z2L7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Crlf3Q9Z2L7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Crlf3Q9Z2L7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Crlf3Q9Z2L7 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.86■□□□□ 0.93
Crlf3Q9Z2L7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.85■□□□□ 0.93
Crlf3Q9Z2L7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Crlf3Q9Z2L7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Crlf3Q9Z2L7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Crlf3Q9Z2L7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Crlf3Q9Z2L7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Crlf3Q9Z2L7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Crlf3Q9Z2L7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Crlf3Q9Z2L7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Crlf3Q9Z2L7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Crlf3Q9Z2L7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Crlf3Q9Z2L7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Crlf3Q9Z2L7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Crlf3Q9Z2L7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Crlf3Q9Z2L7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Crlf3Q9Z2L7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Crlf3Q9Z2L7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Crlf3Q9Z2L7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Crlf3Q9Z2L7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Crlf3Q9Z2L7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
Crlf3Q9Z2L7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Crlf3Q9Z2L7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Crlf3Q9Z2L7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Crlf3Q9Z2L7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Crlf3Q9Z2L7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Crlf3Q9Z2L7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Crlf3Q9Z2L7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Crlf3Q9Z2L7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Crlf3Q9Z2L7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Crlf3Q9Z2L7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Crlf3Q9Z2L7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Crlf3Q9Z2L7 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.82■□□□□ 0.92
Crlf3Q9Z2L7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Crlf3Q9Z2L7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.82■□□□□ 0.92
Crlf3Q9Z2L7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.82■□□□□ 0.92
Crlf3Q9Z2L7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Crlf3Q9Z2L7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Crlf3Q9Z2L7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Crlf3Q9Z2L7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Crlf3Q9Z2L7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Crlf3Q9Z2L7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Crlf3Q9Z2L7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Crlf3Q9Z2L7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Crlf3Q9Z2L7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Crlf3Q9Z2L7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Crlf3Q9Z2L7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Crlf3Q9Z2L7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Crlf3Q9Z2L7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Crlf3Q9Z2L7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Crlf3Q9Z2L7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Crlf3Q9Z2L7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Crlf3Q9Z2L7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.8■□□□□ 0.92
Crlf3Q9Z2L7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Crlf3Q9Z2L7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Crlf3Q9Z2L7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Crlf3Q9Z2L7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Crlf3Q9Z2L7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Crlf3Q9Z2L7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Crlf3Q9Z2L7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Crlf3Q9Z2L7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Crlf3Q9Z2L7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Crlf3Q9Z2L7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Crlf3Q9Z2L7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Crlf3Q9Z2L7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Crlf3Q9Z2L7 Gm7332-201ENSMUST00000118351 454 ntBASIC20.79■□□□□ 0.92
Crlf3Q9Z2L7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms