Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx9Q9WUH2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx9Q9WUH2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx9Q9WUH2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx9Q9WUH2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx9Q9WUH2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx9Q9WUH2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx9Q9WUH2 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.87■□□□□ 0.77
Lhx9Q9WUH2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Lhx9Q9WUH2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx9Q9WUH2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx9Q9WUH2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx9Q9WUH2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx9Q9WUH2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Lhx9Q9WUH2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx9Q9WUH2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx9Q9WUH2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Lhx9Q9WUH2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx9Q9WUH2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.85■□□□□ 0.77
Lhx9Q9WUH2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx9Q9WUH2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx9Q9WUH2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.85■□□□□ 0.77
Lhx9Q9WUH2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Lhx9Q9WUH2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx9Q9WUH2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lhx9Q9WUH2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.84■□□□□ 0.77
Lhx9Q9WUH2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lhx9Q9WUH2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.84■□□□□ 0.77
Lhx9Q9WUH2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lhx9Q9WUH2 Gm12922-201ENSMUST00000120626 809 ntBASIC19.83■□□□□ 0.77
Lhx9Q9WUH2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.83■□□□□ 0.77
Lhx9Q9WUH2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lhx9Q9WUH2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx9Q9WUH2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx9Q9WUH2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx9Q9WUH2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.82■□□□□ 0.76
Lhx9Q9WUH2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx9Q9WUH2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx9Q9WUH2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx9Q9WUH2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
Lhx9Q9WUH2 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.81■□□□□ 0.76
Lhx9Q9WUH2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx9Q9WUH2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Lhx9Q9WUH2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx9Q9WUH2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx9Q9WUH2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx9Q9WUH2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Lhx9Q9WUH2 Gm21956-201ENSMUST00000179946 522 ntBASIC19.81■□□□□ 0.76
Lhx9Q9WUH2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx9Q9WUH2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx9Q9WUH2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Lhx9Q9WUH2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx9Q9WUH2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.81■□□□□ 0.76
Lhx9Q9WUH2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx9Q9WUH2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx9Q9WUH2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx9Q9WUH2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx9Q9WUH2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx9Q9WUH2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx9Q9WUH2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.79■□□□□ 0.76
Lhx9Q9WUH2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx9Q9WUH2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.79■□□□□ 0.76
Lhx9Q9WUH2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.79■□□□□ 0.76
Lhx9Q9WUH2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.79■□□□□ 0.76
Lhx9Q9WUH2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx9Q9WUH2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Lhx9Q9WUH2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx9Q9WUH2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx9Q9WUH2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx9Q9WUH2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx9Q9WUH2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx9Q9WUH2 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.78■□□□□ 0.76
Lhx9Q9WUH2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx9Q9WUH2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.78■□□□□ 0.76
Lhx9Q9WUH2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.78■□□□□ 0.76
Lhx9Q9WUH2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx9Q9WUH2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx9Q9WUH2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx9Q9WUH2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx9Q9WUH2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx9Q9WUH2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx9Q9WUH2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx9Q9WUH2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx9Q9WUH2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx9Q9WUH2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Lhx9Q9WUH2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Lhx9Q9WUH2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx9Q9WUH2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx9Q9WUH2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx9Q9WUH2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Lhx9Q9WUH2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx9Q9WUH2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx9Q9WUH2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx9Q9WUH2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.76■□□□□ 0.75
Lhx9Q9WUH2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
Lhx9Q9WUH2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.76■□□□□ 0.75
Lhx9Q9WUH2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx9Q9WUH2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx9Q9WUH2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx9Q9WUH2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms