Protein–RNA interactions for Protein: Q9JJZ9

Cngb3, Cyclic nucleotide-gated cation channel beta-3, mousemouse

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cngb3Q9JJZ9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.58■□□□□ 0.89
Cngb3Q9JJZ9 Gm5921-201ENSMUST00000075898 882 ntBASIC20.58■□□□□ 0.89
Cngb3Q9JJZ9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cngb3Q9JJZ9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cngb3Q9JJZ9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cngb3Q9JJZ9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Cngb3Q9JJZ9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cngb3Q9JJZ9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Cngb3Q9JJZ9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.57■□□□□ 0.88
Cngb3Q9JJZ9 Gm43566-201ENSMUST00000196851 808 ntBASIC20.57■□□□□ 0.88
Cngb3Q9JJZ9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cngb3Q9JJZ9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cngb3Q9JJZ9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cngb3Q9JJZ9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cngb3Q9JJZ9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cngb3Q9JJZ9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cngb3Q9JJZ9 Gm13238-201ENSMUST00000117655 780 ntBASIC20.56■□□□□ 0.88
Cngb3Q9JJZ9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cngb3Q9JJZ9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.56■□□□□ 0.88
Cngb3Q9JJZ9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cngb3Q9JJZ9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cngb3Q9JJZ9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cngb3Q9JJZ9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.56■□□□□ 0.88
Cngb3Q9JJZ9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cngb3Q9JJZ9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
Cngb3Q9JJZ9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cngb3Q9JJZ9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cngb3Q9JJZ9 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.55■□□□□ 0.88
Cngb3Q9JJZ9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Cngb3Q9JJZ9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cngb3Q9JJZ9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cngb3Q9JJZ9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cngb3Q9JJZ9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cngb3Q9JJZ9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cngb3Q9JJZ9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cngb3Q9JJZ9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cngb3Q9JJZ9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cngb3Q9JJZ9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cngb3Q9JJZ9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Cngb3Q9JJZ9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cngb3Q9JJZ9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cngb3Q9JJZ9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cngb3Q9JJZ9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cngb3Q9JJZ9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cngb3Q9JJZ9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cngb3Q9JJZ9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cngb3Q9JJZ9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cngb3Q9JJZ9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cngb3Q9JJZ9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cngb3Q9JJZ9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cngb3Q9JJZ9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cngb3Q9JJZ9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cngb3Q9JJZ9 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.52■□□□□ 0.88
Cngb3Q9JJZ9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cngb3Q9JJZ9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Cngb3Q9JJZ9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Cngb3Q9JJZ9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Cngb3Q9JJZ9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cngb3Q9JJZ9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cngb3Q9JJZ9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Cngb3Q9JJZ9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cngb3Q9JJZ9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.51■□□□□ 0.87
Cngb3Q9JJZ9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cngb3Q9JJZ9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cngb3Q9JJZ9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cngb3Q9JJZ9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cngb3Q9JJZ9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cngb3Q9JJZ9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cngb3Q9JJZ9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cngb3Q9JJZ9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.5■□□□□ 0.87
Cngb3Q9JJZ9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cngb3Q9JJZ9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cngb3Q9JJZ9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cngb3Q9JJZ9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cngb3Q9JJZ9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cngb3Q9JJZ9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.49■□□□□ 0.87
Cngb3Q9JJZ9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.49■□□□□ 0.87
Cngb3Q9JJZ9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cngb3Q9JJZ9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.49■□□□□ 0.87
Cngb3Q9JJZ9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.49■□□□□ 0.87
Cngb3Q9JJZ9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cngb3Q9JJZ9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cngb3Q9JJZ9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cngb3Q9JJZ9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.49■□□□□ 0.87
Cngb3Q9JJZ9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cngb3Q9JJZ9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cngb3Q9JJZ9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cngb3Q9JJZ9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cngb3Q9JJZ9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Cngb3Q9JJZ9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Cngb3Q9JJZ9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cngb3Q9JJZ9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cngb3Q9JJZ9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.47■□□□□ 0.87
Cngb3Q9JJZ9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Cngb3Q9JJZ9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cngb3Q9JJZ9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cngb3Q9JJZ9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cngb3Q9JJZ9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cngb3Q9JJZ9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cngb3Q9JJZ9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms