Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rbfox1Q9JJ43 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rbfox1Q9JJ43 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rbfox1Q9JJ43 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rbfox1Q9JJ43 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
Rbfox1Q9JJ43 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rbfox1Q9JJ43 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rbfox1Q9JJ43 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.65■□□□□ 0.42
Rbfox1Q9JJ43 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Rbfox1Q9JJ43 Gm11175-201ENSMUST00000116172 543 ntBASIC17.64■□□□□ 0.41
Rbfox1Q9JJ43 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rbfox1Q9JJ43 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rbfox1Q9JJ43 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.64■□□□□ 0.41
Rbfox1Q9JJ43 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rbfox1Q9JJ43 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rbfox1Q9JJ43 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rbfox1Q9JJ43 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rbfox1Q9JJ43 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rbfox1Q9JJ43 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rbfox1Q9JJ43 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rbfox1Q9JJ43 Gm10420-201ENSMUST00000121713 882 ntBASIC17.63■□□□□ 0.41
Rbfox1Q9JJ43 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.63■□□□□ 0.41
Rbfox1Q9JJ43 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rbfox1Q9JJ43 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rbfox1Q9JJ43 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rbfox1Q9JJ43 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rbfox1Q9JJ43 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rbfox1Q9JJ43 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rbfox1Q9JJ43 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rbfox1Q9JJ43 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rbfox1Q9JJ43 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rbfox1Q9JJ43 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rbfox1Q9JJ43 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.62■□□□□ 0.41
Rbfox1Q9JJ43 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Rbfox1Q9JJ43 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rbfox1Q9JJ43 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.62■□□□□ 0.41
Rbfox1Q9JJ43 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rbfox1Q9JJ43 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rbfox1Q9JJ43 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rbfox1Q9JJ43 Iqck-206ENSMUST00000208658 2891 ntBASIC17.61■□□□□ 0.41
Rbfox1Q9JJ43 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.61■□□□□ 0.41
Rbfox1Q9JJ43 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rbfox1Q9JJ43 Mir6538-201ENSMUST00000183713 110 ntBASIC17.61■□□□□ 0.41
Rbfox1Q9JJ43 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rbfox1Q9JJ43 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.61■□□□□ 0.41
Rbfox1Q9JJ43 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rbfox1Q9JJ43 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rbfox1Q9JJ43 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.6■□□□□ 0.41
Rbfox1Q9JJ43 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.6■□□□□ 0.41
Rbfox1Q9JJ43 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.6■□□□□ 0.41
Rbfox1Q9JJ43 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rbfox1Q9JJ43 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rbfox1Q9JJ43 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rbfox1Q9JJ43 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rbfox1Q9JJ43 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rbfox1Q9JJ43 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbfox1Q9JJ43 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbfox1Q9JJ43 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbfox1Q9JJ43 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rbfox1Q9JJ43 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rbfox1Q9JJ43 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbfox1Q9JJ43 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbfox1Q9JJ43 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbfox1Q9JJ43 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbfox1Q9JJ43 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.59■□□□□ 0.41
Rbfox1Q9JJ43 Gm12366-201ENSMUST00000121722 873 ntBASIC17.59■□□□□ 0.41
Rbfox1Q9JJ43 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.59■□□□□ 0.41
Rbfox1Q9JJ43 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.59■□□□□ 0.41
Rbfox1Q9JJ43 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rbfox1Q9JJ43 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.59■□□□□ 0.41
Rbfox1Q9JJ43 Gm5786-201ENSMUST00000085368 882 ntBASIC17.59■□□□□ 0.41
Rbfox1Q9JJ43 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Rbfox1Q9JJ43 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbfox1Q9JJ43 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rbfox1Q9JJ43 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Rbfox1Q9JJ43 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbfox1Q9JJ43 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbfox1Q9JJ43 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rbfox1Q9JJ43 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rbfox1Q9JJ43 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.58■□□□□ 0.4
Rbfox1Q9JJ43 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rbfox1Q9JJ43 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rbfox1Q9JJ43 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rbfox1Q9JJ43 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rbfox1Q9JJ43 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rbfox1Q9JJ43 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rbfox1Q9JJ43 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rbfox1Q9JJ43 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rbfox1Q9JJ43 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rbfox1Q9JJ43 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rbfox1Q9JJ43 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rbfox1Q9JJ43 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rbfox1Q9JJ43 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.57■□□□□ 0.4
Rbfox1Q9JJ43 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rbfox1Q9JJ43 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rbfox1Q9JJ43 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rbfox1Q9JJ43 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rbfox1Q9JJ43 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rbfox1Q9JJ43 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rbfox1Q9JJ43 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms