Protein–RNA interactions for Protein: Q9ERE8

Tlnrd1, Talin rod domain-containing protein 1, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlnrd1Q9ERE8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlnrd1Q9ERE8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tlnrd1Q9ERE8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlnrd1Q9ERE8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlnrd1Q9ERE8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlnrd1Q9ERE8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tlnrd1Q9ERE8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlnrd1Q9ERE8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlnrd1Q9ERE8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlnrd1Q9ERE8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlnrd1Q9ERE8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlnrd1Q9ERE8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tlnrd1Q9ERE8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlnrd1Q9ERE8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlnrd1Q9ERE8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Tlnrd1Q9ERE8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlnrd1Q9ERE8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlnrd1Q9ERE8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlnrd1Q9ERE8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Tlnrd1Q9ERE8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlnrd1Q9ERE8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlnrd1Q9ERE8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlnrd1Q9ERE8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlnrd1Q9ERE8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlnrd1Q9ERE8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Tlnrd1Q9ERE8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlnrd1Q9ERE8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlnrd1Q9ERE8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlnrd1Q9ERE8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.42■□□□□ 0.38
Tlnrd1Q9ERE8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tlnrd1Q9ERE8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tlnrd1Q9ERE8 Cap2-205ENSMUST00000225824 1634 ntBASIC17.42■□□□□ 0.38
Tlnrd1Q9ERE8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlnrd1Q9ERE8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlnrd1Q9ERE8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Tlnrd1Q9ERE8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Tlnrd1Q9ERE8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tlnrd1Q9ERE8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.42■□□□□ 0.38
Tlnrd1Q9ERE8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlnrd1Q9ERE8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tlnrd1Q9ERE8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlnrd1Q9ERE8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlnrd1Q9ERE8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.41■□□□□ 0.38
Tlnrd1Q9ERE8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlnrd1Q9ERE8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.41■□□□□ 0.38
Tlnrd1Q9ERE8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlnrd1Q9ERE8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlnrd1Q9ERE8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.4■□□□□ 0.38
Tlnrd1Q9ERE8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tlnrd1Q9ERE8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tlnrd1Q9ERE8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tlnrd1Q9ERE8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tlnrd1Q9ERE8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tlnrd1Q9ERE8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tlnrd1Q9ERE8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tlnrd1Q9ERE8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tlnrd1Q9ERE8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Tlnrd1Q9ERE8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tlnrd1Q9ERE8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.39■□□□□ 0.37
Tlnrd1Q9ERE8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.39■□□□□ 0.37
Tlnrd1Q9ERE8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tlnrd1Q9ERE8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.39■□□□□ 0.37
Tlnrd1Q9ERE8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tlnrd1Q9ERE8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tlnrd1Q9ERE8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tlnrd1Q9ERE8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Tlnrd1Q9ERE8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.38■□□□□ 0.37
Tlnrd1Q9ERE8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.38■□□□□ 0.37
Tlnrd1Q9ERE8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Tlnrd1Q9ERE8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Tlnrd1Q9ERE8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tlnrd1Q9ERE8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tlnrd1Q9ERE8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Tlnrd1Q9ERE8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tlnrd1Q9ERE8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tlnrd1Q9ERE8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Tlnrd1Q9ERE8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tlnrd1Q9ERE8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tlnrd1Q9ERE8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Tlnrd1Q9ERE8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tlnrd1Q9ERE8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tlnrd1Q9ERE8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tlnrd1Q9ERE8 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.37■□□□□ 0.37
Tlnrd1Q9ERE8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tlnrd1Q9ERE8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tlnrd1Q9ERE8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tlnrd1Q9ERE8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.36■□□□□ 0.37
Tlnrd1Q9ERE8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tlnrd1Q9ERE8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Tlnrd1Q9ERE8 Gm10420-201ENSMUST00000121713 882 ntBASIC17.36■□□□□ 0.37
Tlnrd1Q9ERE8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tlnrd1Q9ERE8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tlnrd1Q9ERE8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tlnrd1Q9ERE8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tlnrd1Q9ERE8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tlnrd1Q9ERE8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tlnrd1Q9ERE8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Tlnrd1Q9ERE8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tlnrd1Q9ERE8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.36■□□□□ 0.37
Tlnrd1Q9ERE8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms