Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hmgn3Q9DCB1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hmgn3Q9DCB1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hmgn3Q9DCB1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Hmgn3Q9DCB1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.51■□□□□ 0.71
Hmgn3Q9DCB1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hmgn3Q9DCB1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hmgn3Q9DCB1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.51■□□□□ 0.71
Hmgn3Q9DCB1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hmgn3Q9DCB1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hmgn3Q9DCB1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Hmgn3Q9DCB1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hmgn3Q9DCB1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hmgn3Q9DCB1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Hmgn3Q9DCB1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hmgn3Q9DCB1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.5■□□□□ 0.71
Hmgn3Q9DCB1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.5■□□□□ 0.71
Hmgn3Q9DCB1 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.5■□□□□ 0.71
Hmgn3Q9DCB1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hmgn3Q9DCB1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hmgn3Q9DCB1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hmgn3Q9DCB1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.5■□□□□ 0.71
Hmgn3Q9DCB1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.5■□□□□ 0.71
Hmgn3Q9DCB1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Hmgn3Q9DCB1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hmgn3Q9DCB1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hmgn3Q9DCB1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hmgn3Q9DCB1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hmgn3Q9DCB1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hmgn3Q9DCB1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hmgn3Q9DCB1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Hmgn3Q9DCB1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hmgn3Q9DCB1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hmgn3Q9DCB1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.48■□□□□ 0.71
Hmgn3Q9DCB1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hmgn3Q9DCB1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Hmgn3Q9DCB1 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.48■□□□□ 0.71
Hmgn3Q9DCB1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hmgn3Q9DCB1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hmgn3Q9DCB1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hmgn3Q9DCB1 Gm4799-201ENSMUST00000095396 657 ntBASIC19.48■□□□□ 0.71
Hmgn3Q9DCB1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Hmgn3Q9DCB1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hmgn3Q9DCB1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hmgn3Q9DCB1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hmgn3Q9DCB1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.48■□□□□ 0.71
Hmgn3Q9DCB1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hmgn3Q9DCB1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hmgn3Q9DCB1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Hmgn3Q9DCB1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hmgn3Q9DCB1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hmgn3Q9DCB1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hmgn3Q9DCB1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hmgn3Q9DCB1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.47■□□□□ 0.71
Hmgn3Q9DCB1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmgn3Q9DCB1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmgn3Q9DCB1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.46■□□□□ 0.71
Hmgn3Q9DCB1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Hmgn3Q9DCB1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hmgn3Q9DCB1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmgn3Q9DCB1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmgn3Q9DCB1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Hmgn3Q9DCB1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmgn3Q9DCB1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmgn3Q9DCB1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.45■□□□□ 0.7
Hmgn3Q9DCB1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmgn3Q9DCB1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmgn3Q9DCB1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmgn3Q9DCB1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmgn3Q9DCB1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmgn3Q9DCB1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgn3Q9DCB1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgn3Q9DCB1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgn3Q9DCB1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgn3Q9DCB1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgn3Q9DCB1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Hmgn3Q9DCB1 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.44■□□□□ 0.7
Hmgn3Q9DCB1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgn3Q9DCB1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Hmgn3Q9DCB1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgn3Q9DCB1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Hmgn3Q9DCB1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Hmgn3Q9DCB1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Hmgn3Q9DCB1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgn3Q9DCB1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgn3Q9DCB1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgn3Q9DCB1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Hmgn3Q9DCB1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.43■□□□□ 0.7
Hmgn3Q9DCB1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgn3Q9DCB1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgn3Q9DCB1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmgn3Q9DCB1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmgn3Q9DCB1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmgn3Q9DCB1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmgn3Q9DCB1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmgn3Q9DCB1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.42■□□□□ 0.7
Hmgn3Q9DCB1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmgn3Q9DCB1 Gm7432-201ENSMUST00000210343 879 ntBASIC19.42■□□□□ 0.7
Hmgn3Q9DCB1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmgn3Q9DCB1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms