Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.35■□□□□ 0.37
ShpkQ9D5J6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ShpkQ9D5J6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ShpkQ9D5J6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ShpkQ9D5J6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ShpkQ9D5J6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.35■□□□□ 0.37
ShpkQ9D5J6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ShpkQ9D5J6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ShpkQ9D5J6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ShpkQ9D5J6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ShpkQ9D5J6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ShpkQ9D5J6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.34■□□□□ 0.37
ShpkQ9D5J6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ShpkQ9D5J6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ShpkQ9D5J6 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.34■□□□□ 0.37
ShpkQ9D5J6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ShpkQ9D5J6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ShpkQ9D5J6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ShpkQ9D5J6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ShpkQ9D5J6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ShpkQ9D5J6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.33■□□□□ 0.37
ShpkQ9D5J6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ShpkQ9D5J6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ShpkQ9D5J6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ShpkQ9D5J6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ShpkQ9D5J6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ShpkQ9D5J6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ShpkQ9D5J6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShpkQ9D5J6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShpkQ9D5J6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShpkQ9D5J6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShpkQ9D5J6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ShpkQ9D5J6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ShpkQ9D5J6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.32■□□□□ 0.36
ShpkQ9D5J6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShpkQ9D5J6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ShpkQ9D5J6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.32■□□□□ 0.36
ShpkQ9D5J6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShpkQ9D5J6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShpkQ9D5J6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShpkQ9D5J6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.32■□□□□ 0.36
ShpkQ9D5J6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShpkQ9D5J6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShpkQ9D5J6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.32■□□□□ 0.36
ShpkQ9D5J6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ShpkQ9D5J6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShpkQ9D5J6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShpkQ9D5J6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShpkQ9D5J6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.31■□□□□ 0.36
ShpkQ9D5J6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ShpkQ9D5J6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ShpkQ9D5J6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ShpkQ9D5J6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShpkQ9D5J6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShpkQ9D5J6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShpkQ9D5J6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ShpkQ9D5J6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShpkQ9D5J6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.3■□□□□ 0.36
ShpkQ9D5J6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ShpkQ9D5J6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.3■□□□□ 0.36
ShpkQ9D5J6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShpkQ9D5J6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShpkQ9D5J6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ShpkQ9D5J6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShpkQ9D5J6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShpkQ9D5J6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShpkQ9D5J6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShpkQ9D5J6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShpkQ9D5J6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ShpkQ9D5J6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShpkQ9D5J6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ShpkQ9D5J6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.29■□□□□ 0.36
ShpkQ9D5J6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShpkQ9D5J6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShpkQ9D5J6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
ShpkQ9D5J6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.29■□□□□ 0.36
ShpkQ9D5J6 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.29■□□□□ 0.36
ShpkQ9D5J6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ShpkQ9D5J6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShpkQ9D5J6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShpkQ9D5J6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.29■□□□□ 0.36
ShpkQ9D5J6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
ShpkQ9D5J6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.28■□□□□ 0.36
ShpkQ9D5J6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShpkQ9D5J6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShpkQ9D5J6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShpkQ9D5J6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShpkQ9D5J6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ShpkQ9D5J6 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShpkQ9D5J6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShpkQ9D5J6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShpkQ9D5J6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
ShpkQ9D5J6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.28■□□□□ 0.36
ShpkQ9D5J6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.28■□□□□ 0.36
ShpkQ9D5J6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShpkQ9D5J6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShpkQ9D5J6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShpkQ9D5J6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShpkQ9D5J6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ShpkQ9D5J6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms