Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
5530400C23RikQ9D3I0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
5530400C23RikQ9D3I0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
5530400C23RikQ9D3I0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.39■□□□□ 0.85
5530400C23RikQ9D3I0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.39■□□□□ 0.85
5530400C23RikQ9D3I0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
5530400C23RikQ9D3I0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
5530400C23RikQ9D3I0 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.39■□□□□ 0.85
5530400C23RikQ9D3I0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
5530400C23RikQ9D3I0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
5530400C23RikQ9D3I0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
5530400C23RikQ9D3I0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
5530400C23RikQ9D3I0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
5530400C23RikQ9D3I0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
5530400C23RikQ9D3I0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
5530400C23RikQ9D3I0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
5530400C23RikQ9D3I0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
5530400C23RikQ9D3I0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.38■□□□□ 0.85
5530400C23RikQ9D3I0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
5530400C23RikQ9D3I0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
5530400C23RikQ9D3I0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.37■□□□□ 0.85
5530400C23RikQ9D3I0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
5530400C23RikQ9D3I0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
5530400C23RikQ9D3I0 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.37■□□□□ 0.85
5530400C23RikQ9D3I0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
5530400C23RikQ9D3I0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
5530400C23RikQ9D3I0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
5530400C23RikQ9D3I0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
5530400C23RikQ9D3I0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
5530400C23RikQ9D3I0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
5530400C23RikQ9D3I0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
5530400C23RikQ9D3I0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.36■□□□□ 0.85
5530400C23RikQ9D3I0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
5530400C23RikQ9D3I0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.36■□□□□ 0.85
5530400C23RikQ9D3I0 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.36■□□□□ 0.85
5530400C23RikQ9D3I0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
5530400C23RikQ9D3I0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
5530400C23RikQ9D3I0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
5530400C23RikQ9D3I0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
5530400C23RikQ9D3I0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
5530400C23RikQ9D3I0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
5530400C23RikQ9D3I0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
5530400C23RikQ9D3I0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
5530400C23RikQ9D3I0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
5530400C23RikQ9D3I0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
5530400C23RikQ9D3I0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
5530400C23RikQ9D3I0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
5530400C23RikQ9D3I0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
5530400C23RikQ9D3I0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
5530400C23RikQ9D3I0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
5530400C23RikQ9D3I0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
5530400C23RikQ9D3I0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
5530400C23RikQ9D3I0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
5530400C23RikQ9D3I0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
5530400C23RikQ9D3I0 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.34■□□□□ 0.85
5530400C23RikQ9D3I0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
5530400C23RikQ9D3I0 Gm15546-201ENSMUST00000122095 826 ntBASIC20.34■□□□□ 0.85
5530400C23RikQ9D3I0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.34■□□□□ 0.85
5530400C23RikQ9D3I0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
5530400C23RikQ9D3I0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
5530400C23RikQ9D3I0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
5530400C23RikQ9D3I0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
5530400C23RikQ9D3I0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
5530400C23RikQ9D3I0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
5530400C23RikQ9D3I0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
5530400C23RikQ9D3I0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
5530400C23RikQ9D3I0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.33■□□□□ 0.85
5530400C23RikQ9D3I0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.33■□□□□ 0.84
5530400C23RikQ9D3I0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
5530400C23RikQ9D3I0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
5530400C23RikQ9D3I0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
5530400C23RikQ9D3I0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
5530400C23RikQ9D3I0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
5530400C23RikQ9D3I0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
5530400C23RikQ9D3I0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
5530400C23RikQ9D3I0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.32■□□□□ 0.84
5530400C23RikQ9D3I0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
5530400C23RikQ9D3I0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
5530400C23RikQ9D3I0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
5530400C23RikQ9D3I0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
5530400C23RikQ9D3I0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
5530400C23RikQ9D3I0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.31■□□□□ 0.84
5530400C23RikQ9D3I0 Gm10399-202ENSMUST00000202768 748 ntBASIC20.31■□□□□ 0.84
5530400C23RikQ9D3I0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
5530400C23RikQ9D3I0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
5530400C23RikQ9D3I0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
5530400C23RikQ9D3I0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
5530400C23RikQ9D3I0 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.3■□□□□ 0.84
5530400C23RikQ9D3I0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
5530400C23RikQ9D3I0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
5530400C23RikQ9D3I0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
5530400C23RikQ9D3I0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
5530400C23RikQ9D3I0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
5530400C23RikQ9D3I0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
5530400C23RikQ9D3I0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
5530400C23RikQ9D3I0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
5530400C23RikQ9D3I0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
5530400C23RikQ9D3I0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
5530400C23RikQ9D3I0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
5530400C23RikQ9D3I0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms