Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Lysmd1Q9D0E3 Gm13836-201ENSMUST00000121159 501 ntBASIC23■■□□□ 1.27
Lysmd1Q9D0E3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Lysmd1Q9D0E3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
Lysmd1Q9D0E3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC23■■□□□ 1.27
Lysmd1Q9D0E3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC23■■□□□ 1.27
Lysmd1Q9D0E3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Lysmd1Q9D0E3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.99■■□□□ 1.27
Lysmd1Q9D0E3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC22.99■■□□□ 1.27
Lysmd1Q9D0E3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Lysmd1Q9D0E3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Lysmd1Q9D0E3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC22.99■■□□□ 1.27
Lysmd1Q9D0E3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Lysmd1Q9D0E3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC22.99■■□□□ 1.27
Lysmd1Q9D0E3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.99■■□□□ 1.27
Lysmd1Q9D0E3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Lysmd1Q9D0E3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Lysmd1Q9D0E3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC22.98■■□□□ 1.27
Lysmd1Q9D0E3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
Lysmd1Q9D0E3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Lysmd1Q9D0E3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Lysmd1Q9D0E3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC22.97■■□□□ 1.27
Lysmd1Q9D0E3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC22.97■■□□□ 1.27
Lysmd1Q9D0E3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Lysmd1Q9D0E3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC22.97■■□□□ 1.27
Lysmd1Q9D0E3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Lysmd1Q9D0E3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Lysmd1Q9D0E3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Lysmd1Q9D0E3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Lysmd1Q9D0E3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC22.96■■□□□ 1.27
Lysmd1Q9D0E3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Lysmd1Q9D0E3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC22.96■■□□□ 1.27
Lysmd1Q9D0E3 Zxda-201ENSMUST00000117281 2621 ntBASIC22.96■■□□□ 1.27
Lysmd1Q9D0E3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Lysmd1Q9D0E3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Lysmd1Q9D0E3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Lysmd1Q9D0E3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC22.95■■□□□ 1.26
Lysmd1Q9D0E3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Lysmd1Q9D0E3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Lysmd1Q9D0E3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.94■■□□□ 1.26
Lysmd1Q9D0E3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Lysmd1Q9D0E3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Lysmd1Q9D0E3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Lysmd1Q9D0E3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC22.94■■□□□ 1.26
Lysmd1Q9D0E3 Smad6-203ENSMUST00000179458 273 ntBASIC22.94■■□□□ 1.26
Lysmd1Q9D0E3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC22.94■■□□□ 1.26
Lysmd1Q9D0E3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC22.94■■□□□ 1.26
Lysmd1Q9D0E3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Lysmd1Q9D0E3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC22.94■■□□□ 1.26
Lysmd1Q9D0E3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Lysmd1Q9D0E3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Lysmd1Q9D0E3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Lysmd1Q9D0E3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC22.93■■□□□ 1.26
Lysmd1Q9D0E3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Lysmd1Q9D0E3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Lysmd1Q9D0E3 Gm4968-201ENSMUST00000071458 858 ntBASIC22.92■■□□□ 1.26
Lysmd1Q9D0E3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Lysmd1Q9D0E3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Lysmd1Q9D0E3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
Lysmd1Q9D0E3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Lysmd1Q9D0E3 Gm12527-201ENSMUST00000117967 564 ntBASIC22.91■■□□□ 1.26
Lysmd1Q9D0E3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Lysmd1Q9D0E3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Lysmd1Q9D0E3 Gm10812-201ENSMUST00000099864 546 ntBASIC22.9■■□□□ 1.26
Lysmd1Q9D0E3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Lysmd1Q9D0E3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Lysmd1Q9D0E3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Lysmd1Q9D0E3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Lysmd1Q9D0E3 Gm13168-201ENSMUST00000121771 632 ntBASIC22.89■■□□□ 1.25
Lysmd1Q9D0E3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Lysmd1Q9D0E3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Lysmd1Q9D0E3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC22.88■■□□□ 1.25
Lysmd1Q9D0E3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Lysmd1Q9D0E3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.88■■□□□ 1.25
Lysmd1Q9D0E3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.88■■□□□ 1.25
Lysmd1Q9D0E3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC22.87■■□□□ 1.25
Lysmd1Q9D0E3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Lysmd1Q9D0E3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Lysmd1Q9D0E3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.87■■□□□ 1.25
Lysmd1Q9D0E3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Lysmd1Q9D0E3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Lysmd1Q9D0E3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Lysmd1Q9D0E3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Lysmd1Q9D0E3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
Lysmd1Q9D0E3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Lysmd1Q9D0E3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Lysmd1Q9D0E3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Lysmd1Q9D0E3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC22.85■■□□□ 1.25
Lysmd1Q9D0E3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC22.85■■□□□ 1.25
Lysmd1Q9D0E3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Lysmd1Q9D0E3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Lysmd1Q9D0E3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Lysmd1Q9D0E3 Gm10209-201ENSMUST00000203397 1607 ntBASIC22.84■■□□□ 1.25
Lysmd1Q9D0E3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
Lysmd1Q9D0E3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC22.84■■□□□ 1.25
Lysmd1Q9D0E3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC22.84■■□□□ 1.25
Lysmd1Q9D0E3 Gm29241-201ENSMUST00000189260 1096 ntBASIC22.84■■□□□ 1.25
Lysmd1Q9D0E3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC22.84■■□□□ 1.25
Lysmd1Q9D0E3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Lysmd1Q9D0E3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms