Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Otud1Q9CUB6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Otud1Q9CUB6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Otud1Q9CUB6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Otud1Q9CUB6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Otud1Q9CUB6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Otud1Q9CUB6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Otud1Q9CUB6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Otud1Q9CUB6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Otud1Q9CUB6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Otud1Q9CUB6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Otud1Q9CUB6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Otud1Q9CUB6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Otud1Q9CUB6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Otud1Q9CUB6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Otud1Q9CUB6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.66■□□□□ 0.74
Otud1Q9CUB6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Otud1Q9CUB6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Otud1Q9CUB6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.66■□□□□ 0.74
Otud1Q9CUB6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Otud1Q9CUB6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Otud1Q9CUB6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Otud1Q9CUB6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Otud1Q9CUB6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Otud1Q9CUB6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.65■□□□□ 0.74
Otud1Q9CUB6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Otud1Q9CUB6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Otud1Q9CUB6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Otud1Q9CUB6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Otud1Q9CUB6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Otud1Q9CUB6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
Otud1Q9CUB6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Otud1Q9CUB6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Otud1Q9CUB6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Otud1Q9CUB6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Otud1Q9CUB6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Otud1Q9CUB6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Otud1Q9CUB6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Otud1Q9CUB6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Otud1Q9CUB6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Otud1Q9CUB6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.62■□□□□ 0.73
Otud1Q9CUB6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Otud1Q9CUB6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Otud1Q9CUB6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Otud1Q9CUB6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Otud1Q9CUB6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.61■□□□□ 0.73
Otud1Q9CUB6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Otud1Q9CUB6 Gm21956-201ENSMUST00000179946 522 ntBASIC19.61■□□□□ 0.73
Otud1Q9CUB6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Otud1Q9CUB6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Otud1Q9CUB6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.6■□□□□ 0.73
Otud1Q9CUB6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Otud1Q9CUB6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Otud1Q9CUB6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Otud1Q9CUB6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Otud1Q9CUB6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.6■□□□□ 0.73
Otud1Q9CUB6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Otud1Q9CUB6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.6■□□□□ 0.73
Otud1Q9CUB6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Otud1Q9CUB6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.6■□□□□ 0.73
Otud1Q9CUB6 Gm9847-201ENSMUST00000052528 599 ntBASIC19.6■□□□□ 0.73
Otud1Q9CUB6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Otud1Q9CUB6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Otud1Q9CUB6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Otud1Q9CUB6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Otud1Q9CUB6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Otud1Q9CUB6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Otud1Q9CUB6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.59■□□□□ 0.73
Otud1Q9CUB6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Otud1Q9CUB6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Otud1Q9CUB6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.58■□□□□ 0.73
Otud1Q9CUB6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Otud1Q9CUB6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Otud1Q9CUB6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Otud1Q9CUB6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Otud1Q9CUB6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Otud1Q9CUB6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
Otud1Q9CUB6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Otud1Q9CUB6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.72
Otud1Q9CUB6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Otud1Q9CUB6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Otud1Q9CUB6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Otud1Q9CUB6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.57■□□□□ 0.72
Otud1Q9CUB6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Otud1Q9CUB6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Otud1Q9CUB6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Otud1Q9CUB6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Otud1Q9CUB6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Otud1Q9CUB6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Otud1Q9CUB6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Otud1Q9CUB6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Otud1Q9CUB6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Otud1Q9CUB6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Otud1Q9CUB6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Otud1Q9CUB6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Otud1Q9CUB6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Otud1Q9CUB6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Otud1Q9CUB6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.55■□□□□ 0.72
Otud1Q9CUB6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Otud1Q9CUB6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms