Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rer1Q9CQU3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.97■□□□□ 0.31
Rer1Q9CQU3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rer1Q9CQU3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
Rer1Q9CQU3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.97■□□□□ 0.31
Rer1Q9CQU3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rer1Q9CQU3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rer1Q9CQU3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rer1Q9CQU3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rer1Q9CQU3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Rer1Q9CQU3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Rer1Q9CQU3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Rer1Q9CQU3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Rer1Q9CQU3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Rer1Q9CQU3 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.96■□□□□ 0.31
Rer1Q9CQU3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rer1Q9CQU3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rer1Q9CQU3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rer1Q9CQU3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rer1Q9CQU3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rer1Q9CQU3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Rer1Q9CQU3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rer1Q9CQU3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rer1Q9CQU3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rer1Q9CQU3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rer1Q9CQU3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rer1Q9CQU3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Rer1Q9CQU3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rer1Q9CQU3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rer1Q9CQU3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rer1Q9CQU3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.94■□□□□ 0.3
Rer1Q9CQU3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rer1Q9CQU3 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.93■□□□□ 0.3
Rer1Q9CQU3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rer1Q9CQU3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rer1Q9CQU3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rer1Q9CQU3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rer1Q9CQU3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.93■□□□□ 0.3
Rer1Q9CQU3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rer1Q9CQU3 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.93■□□□□ 0.3
Rer1Q9CQU3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rer1Q9CQU3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rer1Q9CQU3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.92■□□□□ 0.3
Rer1Q9CQU3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.92■□□□□ 0.3
Rer1Q9CQU3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rer1Q9CQU3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rer1Q9CQU3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rer1Q9CQU3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
Rer1Q9CQU3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rer1Q9CQU3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rer1Q9CQU3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.91■□□□□ 0.3
Rer1Q9CQU3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rer1Q9CQU3 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.91■□□□□ 0.3
Rer1Q9CQU3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rer1Q9CQU3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rer1Q9CQU3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rer1Q9CQU3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.9■□□□□ 0.3
Rer1Q9CQU3 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.9■□□□□ 0.3
Rer1Q9CQU3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rer1Q9CQU3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rer1Q9CQU3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Rer1Q9CQU3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rer1Q9CQU3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rer1Q9CQU3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Rer1Q9CQU3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rer1Q9CQU3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.89■□□□□ 0.29
Rer1Q9CQU3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rer1Q9CQU3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rer1Q9CQU3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rer1Q9CQU3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rer1Q9CQU3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rer1Q9CQU3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rer1Q9CQU3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rer1Q9CQU3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rer1Q9CQU3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rer1Q9CQU3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rer1Q9CQU3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rer1Q9CQU3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.88■□□□□ 0.29
Rer1Q9CQU3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Rer1Q9CQU3 Notumos-201ENSMUST00000151998 2659 ntBASIC16.88■□□□□ 0.29
Rer1Q9CQU3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rer1Q9CQU3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rer1Q9CQU3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rer1Q9CQU3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rer1Q9CQU3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Rer1Q9CQU3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rer1Q9CQU3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Rer1Q9CQU3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rer1Q9CQU3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rer1Q9CQU3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rer1Q9CQU3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.86■□□□□ 0.29
Rer1Q9CQU3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rer1Q9CQU3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.86■□□□□ 0.29
Rer1Q9CQU3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rer1Q9CQU3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rer1Q9CQU3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rer1Q9CQU3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rer1Q9CQU3 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.86■□□□□ 0.29
Rer1Q9CQU3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rer1Q9CQU3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms