Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17■□□□□ 0.31
H2afb1Q9CQ70 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
H2afb1Q9CQ70 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
H2afb1Q9CQ70 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
H2afb1Q9CQ70 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb1Q9CQ70 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb1Q9CQ70 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb1Q9CQ70 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb1Q9CQ70 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.99■□□□□ 0.31
H2afb1Q9CQ70 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb1Q9CQ70 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb1Q9CQ70 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb1Q9CQ70 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb1Q9CQ70 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb1Q9CQ70 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb1Q9CQ70 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb1Q9CQ70 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb1Q9CQ70 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb1Q9CQ70 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb1Q9CQ70 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb1Q9CQ70 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb1Q9CQ70 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb1Q9CQ70 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb1Q9CQ70 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.98■□□□□ 0.31
H2afb1Q9CQ70 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
H2afb1Q9CQ70 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb1Q9CQ70 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.98■□□□□ 0.31
H2afb1Q9CQ70 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb1Q9CQ70 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb1Q9CQ70 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb1Q9CQ70 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb1Q9CQ70 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb1Q9CQ70 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb1Q9CQ70 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb1Q9CQ70 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb1Q9CQ70 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
H2afb1Q9CQ70 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb1Q9CQ70 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb1Q9CQ70 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb1Q9CQ70 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb1Q9CQ70 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
H2afb1Q9CQ70 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb1Q9CQ70 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
H2afb1Q9CQ70 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb1Q9CQ70 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb1Q9CQ70 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb1Q9CQ70 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.96■□□□□ 0.31
H2afb1Q9CQ70 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb1Q9CQ70 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb1Q9CQ70 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb1Q9CQ70 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb1Q9CQ70 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
H2afb1Q9CQ70 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb1Q9CQ70 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb1Q9CQ70 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb1Q9CQ70 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.96■□□□□ 0.31
H2afb1Q9CQ70 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.96■□□□□ 0.31
H2afb1Q9CQ70 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb1Q9CQ70 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
H2afb1Q9CQ70 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
H2afb1Q9CQ70 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb1Q9CQ70 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.95■□□□□ 0.3
H2afb1Q9CQ70 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
H2afb1Q9CQ70 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb1Q9CQ70 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.95■□□□□ 0.3
H2afb1Q9CQ70 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
H2afb1Q9CQ70 Cap2-205ENSMUST00000225824 1634 ntBASIC16.95■□□□□ 0.3
H2afb1Q9CQ70 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb1Q9CQ70 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb1Q9CQ70 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb1Q9CQ70 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb1Q9CQ70 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb1Q9CQ70 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb1Q9CQ70 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
H2afb1Q9CQ70 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.94■□□□□ 0.3
H2afb1Q9CQ70 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb1Q9CQ70 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1Q9CQ70 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1Q9CQ70 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.93■□□□□ 0.3
H2afb1Q9CQ70 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1Q9CQ70 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1Q9CQ70 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1Q9CQ70 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1Q9CQ70 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.93■□□□□ 0.3
H2afb1Q9CQ70 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1Q9CQ70 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.93■□□□□ 0.3
H2afb1Q9CQ70 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1Q9CQ70 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1Q9CQ70 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1Q9CQ70 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
H2afb1Q9CQ70 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb1Q9CQ70 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
H2afb1Q9CQ70 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb1Q9CQ70 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb1Q9CQ70 Gm45444-201ENSMUST00000211394 898 ntBASIC16.92■□□□□ 0.3
H2afb1Q9CQ70 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb1Q9CQ70 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb1Q9CQ70 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb1Q9CQ70 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb1Q9CQ70 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 184.1 ms