Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rfc4Q99J62 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rfc4Q99J62 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rfc4Q99J62 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC24.13■■□□□ 1.45
Rfc4Q99J62 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Rfc4Q99J62 Krt8-ps-201ENSMUST00000208495 945 ntBASIC24.12■■□□□ 1.45
Rfc4Q99J62 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rfc4Q99J62 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Rfc4Q99J62 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rfc4Q99J62 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rfc4Q99J62 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rfc4Q99J62 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rfc4Q99J62 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rfc4Q99J62 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Rfc4Q99J62 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Rfc4Q99J62 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rfc4Q99J62 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Rfc4Q99J62 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rfc4Q99J62 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Rfc4Q99J62 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rfc4Q99J62 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC24.1■■□□□ 1.45
Rfc4Q99J62 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC24.1■■□□□ 1.45
Rfc4Q99J62 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rfc4Q99J62 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rfc4Q99J62 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rfc4Q99J62 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rfc4Q99J62 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
Rfc4Q99J62 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rfc4Q99J62 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
Rfc4Q99J62 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rfc4Q99J62 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Rfc4Q99J62 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Rfc4Q99J62 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rfc4Q99J62 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rfc4Q99J62 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Rfc4Q99J62 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Rfc4Q99J62 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC24.08■■□□□ 1.45
Rfc4Q99J62 Gm8493-201ENSMUST00000196881 489 ntBASIC24.08■■□□□ 1.45
Rfc4Q99J62 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Rfc4Q99J62 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rfc4Q99J62 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rfc4Q99J62 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
Rfc4Q99J62 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC24.07■■□□□ 1.44
Rfc4Q99J62 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC24.07■■□□□ 1.44
Rfc4Q99J62 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC24.07■■□□□ 1.44
Rfc4Q99J62 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rfc4Q99J62 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rfc4Q99J62 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rfc4Q99J62 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rfc4Q99J62 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Rfc4Q99J62 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Rfc4Q99J62 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rfc4Q99J62 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rfc4Q99J62 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rfc4Q99J62 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rfc4Q99J62 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Rfc4Q99J62 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC24.05■■□□□ 1.44
Rfc4Q99J62 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rfc4Q99J62 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rfc4Q99J62 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Rfc4Q99J62 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Rfc4Q99J62 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rfc4Q99J62 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Rfc4Q99J62 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rfc4Q99J62 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rfc4Q99J62 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC24.04■■□□□ 1.44
Rfc4Q99J62 Gm10657-201ENSMUST00000193528 1031 ntBASIC24.04■■□□□ 1.44
Rfc4Q99J62 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rfc4Q99J62 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Rfc4Q99J62 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Rfc4Q99J62 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rfc4Q99J62 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rfc4Q99J62 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Rfc4Q99J62 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rfc4Q99J62 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC24.03■■□□□ 1.44
Rfc4Q99J62 Gm5576-201ENSMUST00000075809 1236 ntBASIC24.03■■□□□ 1.44
Rfc4Q99J62 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Rfc4Q99J62 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Rfc4Q99J62 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC24.02■■□□□ 1.44
Rfc4Q99J62 Gm4430-201ENSMUST00000192413 1943 ntBASIC24.02■■□□□ 1.44
Rfc4Q99J62 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Rfc4Q99J62 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Rfc4Q99J62 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rfc4Q99J62 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC24.01■■□□□ 1.43
Rfc4Q99J62 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Rfc4Q99J62 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rfc4Q99J62 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Rfc4Q99J62 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC24.01■■□□□ 1.43
Rfc4Q99J62 Gm8770-201ENSMUST00000121113 1109 ntBASIC24.01■■□□□ 1.43
Rfc4Q99J62 Wdr70-203ENSMUST00000227371 1130 ntBASIC24.01■■□□□ 1.43
Rfc4Q99J62 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rfc4Q99J62 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Rfc4Q99J62 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC24■■□□□ 1.43
Rfc4Q99J62 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Rfc4Q99J62 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC24■■□□□ 1.43
Rfc4Q99J62 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rfc4Q99J62 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23.99■■□□□ 1.43
Rfc4Q99J62 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rfc4Q99J62 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rfc4Q99J62 Gm7143-201ENSMUST00000222811 859 ntBASIC23.98■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms