Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
Pcdhb5Q91XZ5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhb5Q91XZ5 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Pcdhb5Q91XZ5 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Pcdhb5Q91XZ5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhb5Q91XZ5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhb5Q91XZ5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhb5Q91XZ5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhb5Q91XZ5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhb5Q91XZ5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhb5Q91XZ5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhb5Q91XZ5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhb5Q91XZ5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhb5Q91XZ5 Gm6139-201ENSMUST00000079261 882 ntBASIC24.68■■□□□ 1.54
Pcdhb5Q91XZ5 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC24.68■■□□□ 1.54
Pcdhb5Q91XZ5 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Pcdhb5Q91XZ5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhb5Q91XZ5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhb5Q91XZ5 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC24.66■■□□□ 1.54
Pcdhb5Q91XZ5 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
Pcdhb5Q91XZ5 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhb5Q91XZ5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhb5Q91XZ5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC24.66■■□□□ 1.54
Pcdhb5Q91XZ5 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhb5Q91XZ5 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhb5Q91XZ5 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhb5Q91XZ5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhb5Q91XZ5 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhb5Q91XZ5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhb5Q91XZ5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhb5Q91XZ5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhb5Q91XZ5 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
Pcdhb5Q91XZ5 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdhb5Q91XZ5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdhb5Q91XZ5 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
Pcdhb5Q91XZ5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdhb5Q91XZ5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
Pcdhb5Q91XZ5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.53
Pcdhb5Q91XZ5 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Pcdhb5Q91XZ5 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Pcdhb5Q91XZ5 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC24.64■■□□□ 1.53
Pcdhb5Q91XZ5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Pcdhb5Q91XZ5 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhb5Q91XZ5 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC24.62■■□□□ 1.53
Pcdhb5Q91XZ5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC24.62■■□□□ 1.53
Pcdhb5Q91XZ5 Mir7075-201ENSMUST00000184187 82 ntBASIC24.62■■□□□ 1.53
Pcdhb5Q91XZ5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhb5Q91XZ5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhb5Q91XZ5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC24.61■■□□□ 1.53
Pcdhb5Q91XZ5 Gm8770-201ENSMUST00000121113 1109 ntBASIC24.6■■□□□ 1.53
Pcdhb5Q91XZ5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhb5Q91XZ5 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhb5Q91XZ5 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb5Q91XZ5 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb5Q91XZ5 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb5Q91XZ5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC24.59■■□□□ 1.53
Pcdhb5Q91XZ5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Pcdhb5Q91XZ5 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhb5Q91XZ5 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhb5Q91XZ5 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC24.58■■□□□ 1.53
Pcdhb5Q91XZ5 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC24.58■■□□□ 1.53
Pcdhb5Q91XZ5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhb5Q91XZ5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhb5Q91XZ5 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhb5Q91XZ5 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhb5Q91XZ5 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhb5Q91XZ5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhb5Q91XZ5 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhb5Q91XZ5 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhb5Q91XZ5 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC24.56■■□□□ 1.52
Pcdhb5Q91XZ5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb5Q91XZ5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC24.56■■□□□ 1.52
Pcdhb5Q91XZ5 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb5Q91XZ5 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC24.56■■□□□ 1.52
Pcdhb5Q91XZ5 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC24.56■■□□□ 1.52
Pcdhb5Q91XZ5 Gm2011-201ENSMUST00000203124 1263 ntBASIC24.56■■□□□ 1.52
Pcdhb5Q91XZ5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb5Q91XZ5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb5Q91XZ5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
Pcdhb5Q91XZ5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb5Q91XZ5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhb5Q91XZ5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhb5Q91XZ5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhb5Q91XZ5 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC24.55■■□□□ 1.52
Pcdhb5Q91XZ5 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Pcdhb5Q91XZ5 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhb5Q91XZ5 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC24.55■■□□□ 1.52
Pcdhb5Q91XZ5 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdhb5Q91XZ5 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
Pcdhb5Q91XZ5 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdhb5Q91XZ5 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdhb5Q91XZ5 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
Pcdhb5Q91XZ5 Gm43759-201ENSMUST00000196925 1261 ntBASIC24.54■■□□□ 1.52
Pcdhb5Q91XZ5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdhb5Q91XZ5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Pcdhb5Q91XZ5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb5Q91XZ5 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC24.53■■□□□ 1.52
Pcdhb5Q91XZ5 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb5Q91XZ5 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Pcdhb5Q91XZ5 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms