Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga4Q91XY4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga4Q91XY4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.31■□□□□ 0.84
Pcdhga4Q91XY4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga4Q91XY4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga4Q91XY4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga4Q91XY4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Pcdhga4Q91XY4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Pcdhga4Q91XY4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.31■□□□□ 0.84
Pcdhga4Q91XY4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.31■□□□□ 0.84
Pcdhga4Q91XY4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga4Q91XY4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga4Q91XY4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga4Q91XY4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Pcdhga4Q91XY4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga4Q91XY4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga4Q91XY4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga4Q91XY4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga4Q91XY4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga4Q91XY4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga4Q91XY4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.3■□□□□ 0.84
Pcdhga4Q91XY4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga4Q91XY4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga4Q91XY4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga4Q91XY4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga4Q91XY4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Pcdhga4Q91XY4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga4Q91XY4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga4Q91XY4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga4Q91XY4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdhga4Q91XY4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhga4Q91XY4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga4Q91XY4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga4Q91XY4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.28■□□□□ 0.84
Pcdhga4Q91XY4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga4Q91XY4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga4Q91XY4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga4Q91XY4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga4Q91XY4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhga4Q91XY4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhga4Q91XY4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga4Q91XY4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga4Q91XY4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhga4Q91XY4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.27■□□□□ 0.84
Pcdhga4Q91XY4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga4Q91XY4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Pcdhga4Q91XY4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhga4Q91XY4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga4Q91XY4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhga4Q91XY4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhga4Q91XY4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhga4Q91XY4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga4Q91XY4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga4Q91XY4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdhga4Q91XY4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga4Q91XY4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga4Q91XY4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.26■□□□□ 0.83
Pcdhga4Q91XY4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga4Q91XY4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhga4Q91XY4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.26■□□□□ 0.83
Pcdhga4Q91XY4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga4Q91XY4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga4Q91XY4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga4Q91XY4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga4Q91XY4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga4Q91XY4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhga4Q91XY4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhga4Q91XY4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Pcdhga4Q91XY4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Pcdhga4Q91XY4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhga4Q91XY4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhga4Q91XY4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhga4Q91XY4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga4Q91XY4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pcdhga4Q91XY4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga4Q91XY4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pcdhga4Q91XY4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga4Q91XY4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.23■□□□□ 0.83
Pcdhga4Q91XY4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga4Q91XY4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.23■□□□□ 0.83
Pcdhga4Q91XY4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga4Q91XY4 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.23■□□□□ 0.83
Pcdhga4Q91XY4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcdhga4Q91XY4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhga4Q91XY4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhga4Q91XY4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhga4Q91XY4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhga4Q91XY4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pcdhga4Q91XY4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhga4Q91XY4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhga4Q91XY4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhga4Q91XY4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.21■□□□□ 0.83
Pcdhga4Q91XY4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhga4Q91XY4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhga4Q91XY4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhga4Q91XY4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhga4Q91XY4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Pcdhga4Q91XY4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhga4Q91XY4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhga4Q91XY4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms